HHsearch alignment for GI: 254780716 and conserved domain: cd05294

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=94.05  E-value=0.55  Score=26.84  Aligned_cols=101  Identities=13%  Similarity=0.265  Sum_probs=55.9

Q ss_pred             EEEEEEC-CHHHHHHHHHHHHCCC--EEEEEECCHH--HHH----HHHHHCCCCC--CCCEECCCHHHHHHHCCCCCEEE
Q ss_conf             0569815-7111688999997898--5999739989--999----9997122112--78403289899986057788999
Q gi|254780716|r    5 DIGIIGL-GSMGSNLSLNILDKGF--RLAVYNKDFE--LTD----VFIKKISGLS--QKVIVTKNLEQMVEAVCKPRKIL   73 (475)
Q Consensus         5 ~IGiIGL-G~MG~~mA~nL~~~G~--~V~vydr~~~--~~~----~l~~~~~~~~--~~~~~~~s~~e~v~~l~~pr~Ii   73 (475)
T Consensus         2 KV~IiGAaG~VG~~~a~~l~~~~~~~el~LiD~~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~d~~~----~~daDivV   77 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLSD----VAGSDIVI   77 (309)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEHHHHCCCCCCCCCCEEEECCCHHH----HCCCCEEE
T ss_conf             89999999769999999998379987599960556434231123554503433688767982798899----68999999


Q ss_pred             EECC---------------CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
Q ss_conf             9769---------------90699999999972078998999679865789999
Q gi|254780716|r   74 MMVT---------------DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQI  112 (475)
Q Consensus        74 l~vp---------------~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~  112 (475)
T Consensus        78 itAG~~rk~g~tR~dLl~~Na~I~~~i~~~i~~~~-p~~ivivvt--NPvDv~t  128 (309)
T cd05294          78 ITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFA-PDTKILVVT--NPVDVMT  128 (309)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-CCEEEEECC--CCHHHHH
T ss_conf             87898899599878999989999999998764269-984999768--9657799