HHsearch alignment for GI: 254780716 and conserved domain: pfam02254

>pfam02254 TrkA_N TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.

Probab=97.43  E-value=0.0051  Score=41.83  Aligned_cols=110  Identities=18%  Similarity=0.218  Sum_probs=70.7

Q ss_pred             EEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEE-CCCHHHHHH-HCCCCCEEEEECCCHHHHH
Q ss_conf             56981571116889999978985999739989999999712211278403-289899986-0577889999769906999
Q gi|254780716|r    6 IGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIV-TKNLEQMVE-AVCKPRKILMMVTDGDPVD   83 (475)
Q Consensus         6 IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~-~~s~~e~v~-~l~~pr~Iil~vp~g~~v~   83 (475)
T Consensus         1 viI~G~g~~G~~la~~L~~~~-~v~vId~d~~~~~~~~~~~~~---vi~GD~~~~~~L~~a~i~~a~~vi~~~~~d~~n~   76 (115)
T pfam02254         1 IIIIGYGRVGRSLAEELREGG-PVVVIDKDPERVEELREEGVP---VVVGDATDEEVLEEAGIEDADAVVAATGDDEANI   76 (115)
T ss_pred             CEEECCCHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHCCCE---EEEEECCCHHHHHHHCCCCCCEEEEECCCHHHHH
T ss_conf             999878889999999998089-999999987998778866986---9999568866787619202879999629849999


Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf             999999720789989996798657899999999984799430
Q gi|254780716|r   84 QLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFI  125 (475)
Q Consensus        84 ~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fi  125 (475)
T Consensus        77 ~~~~~~r~~~~~~~iiar~~~------~~~~~~l~~~Gad~v  112 (115)
T pfam02254        77 LIVLLARELNPAKKIIARAND------PEHAELLRRLGADEV  112 (115)
T ss_pred             HHHHHHHHHCCCCEEEEEECC------HHHHHHHHHCCCCEE
T ss_conf             999999997899809999878------999999997698999