HHsearch alignment for GI: 254780716 and conserved domain: pfam05368
>pfam05368 NmrA NmrA-like family. NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.
Probab=96.60 E-value=0.079 Score=33.02 Aligned_cols=91 Identities=15% Similarity=0.088 Sum_probs=60.6
Q ss_pred EEE-CCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHCCCCCCCCE-ECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 981-5711168899999789859997399899--9999971221127840-32898999860577889999769906999
Q gi|254780716|r 8 IIG-LGSMGSNLSLNILDKGFRLAVYNKDFEL--TDVFIKKISGLSQKVI-VTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 8 iIG-LG~MG~~mA~nL~~~G~~V~vydr~~~~--~~~l~~~~~~~~~~~~-~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
T Consensus 3 V~GatG~iG~~vv~~L~~~g~~Vr~l~R~~~~~~~~~l~~~gve---~v~gD~~d~~sl~~al~gvd~v~~~~~~~~~~- 78 (232)
T pfam05368 3 VFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGVE---LVEGDLDDHESLVEALKGVDVVFSVTGFWLSK- 78 (232)
T ss_pred EECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCE---EEEECCCCHHHHHHHHCCCCEEEEECCCCCCH-
T ss_conf 98968289999999998589938999718736656666417988---99906888789999967998899915887417-
Q ss_pred HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 99999972078998999679865789999999998479943
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYF 124 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~f 124 (475)
T Consensus 79 ----------------------~~~~~~~~~~AA~~aGVk~ 97 (232)
T pfam05368 79 ----------------------EIEDGKKLADAAKEAGVKH 97 (232)
T ss_pred ----------------------HHHHHHHHHHHHHHCCCCC
T ss_conf ----------------------7999999999999739983