HHsearch alignment for GI: 254780716 and conserved domain: smart00859

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=94.66  E-value=0.15  Score=30.95  Aligned_cols=99  Identities=12%  Similarity=0.170  Sum_probs=53.7

Q ss_pred             EEEEEEC-CHHHHHHHHHHHHC-CCEEE-EEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf             0569815-71116889999978-98599-973998999999971221127840328989998605778899997699069
Q gi|254780716|r    5 DIGIIGL-GSMGSNLSLNILDK-GFRLA-VYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP   81 (475)
Q Consensus         5 ~IGiIGL-G~MG~~mA~nL~~~-G~~V~-vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~   81 (475)
T Consensus         1 kVaIvGatGyvG~eli~lL~~hp~~~~~~l~as~~~~G~~i~~~~~~l~~~~~~~~~~~~~~--~~~~Dvvf~a~p~~~s   78 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFE--ELAVDIVFLALPHGVS   78 (122)
T ss_pred             CEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCEECCCCCC--CCCCCEEEECCCCHHH
T ss_conf             98998945199999999998589974577774046589757885966457735056533110--0179999993882788


Q ss_pred             HHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf             9999999972078998999679865
Q gi|254780716|r   82 VDQLIDKLKPLLSPEDILLDGGNSH  106 (475)
Q Consensus        82 v~~vi~~l~~~l~~g~iiID~sts~  106 (475)
T Consensus        79 -~~~~~~~~~~~~~g~~VIDlSadf  102 (122)
T smart00859       79 -KEIAPLLPKAAEAGVKVIDLSSAF  102 (122)
T ss_pred             -HHHHHHHHHHHHCCCEEEECCHHH
T ss_conf             -999998898875698798684775