HHsearch alignment for GI: 254780716 and conserved domain: smart00859
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=94.66 E-value=0.15 Score=30.95 Aligned_cols=99 Identities=12% Similarity=0.170 Sum_probs=53.7
Q ss_pred EEEEEEC-CHHHHHHHHHHHHC-CCEEE-EEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 0569815-71116889999978-98599-973998999999971221127840328989998605778899997699069
Q gi|254780716|r 5 DIGIIGL-GSMGSNLSLNILDK-GFRLA-VYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiIGL-G~MG~~mA~nL~~~-G~~V~-vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
T Consensus 1 kVaIvGatGyvG~eli~lL~~hp~~~~~~l~as~~~~G~~i~~~~~~l~~~~~~~~~~~~~~--~~~~Dvvf~a~p~~~s 78 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFE--ELAVDIVFLALPHGVS 78 (122)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCEECCCCCC--CCCCCEEEECCCCHHH
T ss_conf 98998945199999999998589974577774046589757885966457735056533110--0179999993882788
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 9999999972078998999679865
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSH 106 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~ 106 (475)
T Consensus 79 -~~~~~~~~~~~~~g~~VIDlSadf 102 (122)
T smart00859 79 -KEIAPLLPKAAEAGVKVIDLSSAF 102 (122)
T ss_pred -HHHHHHHHHHHHCCCEEEECCHHH
T ss_conf -999998898875698798684775