HHsearch alignment for GI: 254780717 and conserved domain: cd01019
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=100.00 E-value=0 Score=494.35 Aligned_cols=272 Identities=35% Similarity=0.604 Sum_probs=248.0
Q ss_pred CCCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCE
Q ss_conf 38805999722899999997079441788705899835335680245665025789996766103568999731455767
Q gi|254780717|r 21 AGSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQSNV 100 (294)
Q Consensus 21 ~~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~ 100 (294)
T Consensus 1 aak~~Vvts~~pl~~i~~~I~Gd~v~V~~L~p~g~dpH~yep~p~d~~~l~~Adliv~~G~~lE~wl~k~~~~~~-~~~~ 79 (286)
T cd01019 1 AAEASVLTSIKPLGFIAAAIMGGVGEVEVLVPPGASPHDYELRPSDARKLQEADLVVWIGPDLEAFLDKVLQGRK-KGKV 79 (286)
T ss_pred CCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCC-CCCE
T ss_conf 999879998779999999982895379980599989736768999999996699999969972468999997477-8883
Q ss_pred EEEEECCCCCCCCC-------------CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 99751354462100-------------12111233212247567765555678999999997421865658899899998
Q gi|254780717|r 101 VTLSHSPDLHRILL-------------RDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEF 167 (294)
Q Consensus 101 i~~~~~~~~~~~~~-------------~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~ 167 (294)
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~DPH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~ 159 (286)
T cd01019 80 LTLAKLIDLKTLEDGASHGDHEHDHEHAHGEHDGHEEGGLDPHLWLSPENAAEVAQAVAEKLSALDPDNAATYAANLEAF 159 (286)
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_conf 78533556554334443455455555555654445568999816348477999999999999886822099999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 6312223589998503002781462062157789874981200-346775444978899999999754993899818889
Q gi|254780717|r 168 KNQLSQLDKELHSILQPVEKKKIIVFHEAYRYFASHYNLSIVT-FPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFD 246 (294)
Q Consensus 168 ~~~L~~l~~~~~~~~~~~~~~~~i~~H~a~~Yf~~~~gl~~~~-~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~ 246 (294)
T Consensus 160 ~~~L~~l~~~~~~~l~~~~~~~~v~~H~af~Yfa~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~ 239 (286)
T cd01019 160 NARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFH 239 (286)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 99999999999997445565228985663689998669838678722467789999999999999983998899828989
Q ss_pred HHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 78999999971990899805336787781678999999999998741
Q gi|254780717|r 247 SKIIRSITNDTGVMSAILDPEGMLIAEGPELYFQLMRSMSNSIAKNC 293 (294)
Q Consensus 247 ~~~~~~ia~e~~~~~~~ld~~~~~~~~~~~~Y~~~m~~n~~~l~k~l 293 (294)
T Consensus 240 ~k~a~~ia~e~g~~v~~ld~l~~~~~~~~~~Y~~~m~~n~~~i~~aL 286 (286)
T cd01019 240 PKIAETLAEGTGAKVGELDPLGGLIELGKNSYVNFLRNLADSLASCL 286 (286)
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 39999999971993899637767788874069999999999999769