HHsearch alignment for GI: 254780717 and conserved domain: cd01137
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=100.00 E-value=0 Score=478.88 Aligned_cols=267 Identities=23% Similarity=0.376 Sum_probs=242.6
Q ss_pred CCCCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf 23880599972289999999707944178870589983533568024566502578999676610356899973145576
Q gi|254780717|r 20 RAGSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQSN 99 (294)
Q Consensus 20 ~~~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~ 99 (294)
T Consensus 14 ~~~k~~Vvtt~~pl~~~v~~I~Gd~v~V~~Lvp~g~dPH~yep~p~d~~~l~~Adliv~~G~~lE~~~~k~~~~~~~~~~ 93 (287)
T cd01137 14 AASKLKVVATFSILADIARNIAGDRVNVTSIVPPGADPHEYEPTPSDIKKLSKADLILYNGLNLEPWLERLVKNAGKDVP 93 (287)
T ss_pred CCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCC
T ss_conf 58996699987699999999818845999821879897568899999999957999998588741789999996066898
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79975135446210012111233212247567765555678999999997421865658899899998631222358999
Q gi|254780717|r 100 VVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDKELH 179 (294)
Q Consensus 100 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~~ 179 (294)
T Consensus 94 ~v~~~~~i~~~~~------~~~~~~~~~DPHiWldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~Ld~~~~ 167 (287)
T cd01137 94 VVAVSEGIDPIPL------EEGHYKGKPDPHAWMSPKNAIIYVKNIAKALSEADPANAETYQKNAAAYKAKLKALDEWAK 167 (287)
T ss_pred EEECCCCCCCCCC------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8953588431045------5667889999863579999999999999999986821228999999999999999999999
Q ss_pred HHCC--CCCCCEEEECCCHHHHHHHHCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 8503--002781462062157789874981200-3467754449788999999997549938998188897899999997
Q gi|254780717|r 180 SILQ--PVEKKKIIVFHEAYRYFASHYNLSIVT-FPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITND 256 (294)
Q Consensus 180 ~~~~--~~~~~~~i~~H~a~~Yf~~~~gl~~~~-~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e 256 (294)
T Consensus 168 ~~l~~vp~~~~~~vt~H~af~Yfa~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~i~~if~E~~~~~k~a~~ia~e 247 (287)
T cd01137 168 AKFATIPAEKRKLVTSEGAFSYFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVNDRLMKQVAKE 247 (287)
T ss_pred HHHHCCCCCCCEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 99724874355578517416899986799177644127866669999999999998529978998589990999999997
Q ss_pred HCCCEEE---ECCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 1990899---805336787781678999999999998741
Q gi|254780717|r 257 TGVMSAI---LDPEGMLIAEGPELYFQLMRSMSNSIAKNC 293 (294)
Q Consensus 257 ~~~~~~~---ld~~~~~~~~~~~~Y~~~m~~n~~~l~k~l 293 (294)
T Consensus 248 ~g~~v~~~l~~d~l~~~~~~-~~tY~~~m~~N~~~l~~aL 286 (287)
T cd01137 248 TGAKIGGQLYTDSLSEKGGP-ADTYLDMMEHNLDTIVEGL 286 (287)
T ss_pred CCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHC
T ss_conf 29971462565567888998-3759999999999999864