HHsearch results for GI: 254780717 and protein with PDBid: 1toa_A
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC transporter; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=100.00 E-value=0 Score=444.59 Aligned_cols=270 Identities=20% Similarity=0.297 Sum_probs=235.3
Q ss_pred CCCCCCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCC
Q ss_conf 13238805999722899999997079441788705899835335680245665025789996766103568999731455
Q gi|254780717|r 18 VARAGSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQ 97 (294)
Q Consensus 18 ~~~~~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~ 97 (294)
.++.+++.||||+.|++++|++|+||+++|++|+|+|.|||+|+|||+|+++|++||+||+||.+||+|+.+++.+..+.
T Consensus 33 ~~~~~k~~VV~T~~pl~~iv~~I~gd~v~V~~Lip~g~dPH~yep~p~di~~l~~ADliv~~G~~~E~~~~~~~~~~~~~ 112 (313)
T 1toa_A 33 AAADGKPLVVTTIGMIADAVKNIAQGDVHLKGLMGPGVDPHLYTATAGDVEWLGNADLILYNGLHLETKMGEVFSKLRGS 112 (313)
T ss_dssp ----CCCEEEESSHHHHHHHHHHHGGGSEEEESCCTTCCTTTCCCCHHHHHHHHHCSEEEECCTTCSTTCHHHHHHHTTS
T ss_pred CCCCCCCEEEEECHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 10169947999885999999998088159998159897965676899999999719999983898666789999861466
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76799751354462100121112332122475677655556789999999974218656588998999986312223589
Q gi|254780717|r 98 SNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDKE 177 (294)
Q Consensus 98 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~ 177 (294)
..++....... . ...++++++..|||+|+||.|++.++++|+++|+++||++++.|++|+++|.++|++|+++
T Consensus 113 ~~v~~~~~~~~---~----~~~~~~~~~~~dPH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~n~~~~~~~L~~L~~~ 185 (313)
T 1toa_A 113 RLVVAVSETIP---V----SQRLSLEEAEFDPHVWFDVKLWSYSVKAVYESLCKLLPGKTREFTQRYQAYQQQLDKLDAY 185 (313)
T ss_dssp SEEEEGGGGSC---G----GGSCBSTTSCBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCC---C----HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 65311246777---1----0212545565566521170579999999999998758423799999999999999999999
Q ss_pred HHHHCC--CCCCCEEEECCCHHHHHHHHCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH
Q ss_conf 998503--002781462062157789874981200-34677544497889999999975499389981888978999999
Q gi|254780717|r 178 LHSILQ--PVEKKKIIVFHEAYRYFASHYNLSIVT-FPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSIT 254 (294)
Q Consensus 178 ~~~~~~--~~~~~~~i~~H~a~~Yf~~~~gl~~~~-~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia 254 (294)
++..+. +.+++.++++||+|+||+++|||++.+ +..+++.+||++++.++++.+|+++++|||+|++++++.++.|+
T Consensus 186 ~~~~~~~~~~~~~~~v~~H~a~~Yf~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia 265 (313)
T 1toa_A 186 VRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQRKLPAIFIESSIPHKNVEALR 265 (313)
T ss_dssp HHHHHHTSCGGGCEEEEEESCCHHHHHHHTCEEEEEECSSCSSCCCHHHHHHHHHHHHHTTCSEEEEETTSCTHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH
T ss_conf 99998764303551010266799999976997242235688743146899999999998499889984898909999999
Q ss_pred HHHCCCEEE------ECCCCCCCC-CCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 971990899------805336787-7816789999999999987419
Q gi|254780717|r 255 NDTGVMSAI------LDPEGMLIA-EGPELYFQLMRSMSNSIAKNCS 294 (294)
Q Consensus 255 ~e~~~~~~~------ld~~~~~~~-~~~~~Y~~~m~~n~~~l~k~ls 294 (294)
+++++++.. +.+.+...+ .+.++|++||+.|+++|.++||
T Consensus 266 ~~~~~k~~~v~~~~~l~~d~l~~~~~~~~~Y~~~m~~N~~~i~~aLs 312 (313)
T 1toa_A 266 DAVQARGHVVQIGGELFSDAMGDAGTSEGTYVGMVTHNIDTIVAALA 312 (313)
T ss_dssp HHHHTTTCCCEEEEEECSSSCCCTTSGGGSHHHHHHHHHHHHHHHHC
T ss_pred HHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 98678841324577235444567888867799999999999999867