PSIBLAST alignment of GI: 254780717 and protein with PDB id: 1psz
>gi|7767025|pdb|1PSZ|A Chain A, Pneumococcal Surface Antigen Psaa Length = 303
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 15/287 (5%)
Query: 18 VARAGSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIF 77
L+VV + I I I +V PHEY + AD+IF
Sbjct: 21 TTSGQKLKVVATNSIIADITKNIAGDKIDLHSIVPIGQDPHEYEPLPEDVKKTSEADLIF 80
Query: 78 WLGAEMES----FLVKPLHSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWL 133
+ G +E+ + K + + K N + S + I L + + +D H WL
Sbjct: 81 YNGINLETGGNAWFTKLVENAKKTENKDYFAVSDGVDVIYLEGQN----EKGKEDPHAWL 136
Query: 134 NPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDKELHSILQ--PVEKKKII 191
N N A IA +L KDP NK YEKN +E+ ++L +LDKE P EKK I+
Sbjct: 137 NLENGIIFAKNIAKQLSAKDPNNKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIV 196
Query: 192 VFHEAYRYFASHYNL-SIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKII 250
A++YF+ Y + S + ++ ++ + K+ K+ LF D + +
Sbjct: 197 TSEGAFKYFSKAYGVPSAYIWEINTEEEGTPEQIKTLVEKLRQTKVPSLFVESSVDDRPM 256
Query: 251 RSITNDTGVMSAI---LDPEGMLIAEGPELYFQLMRSMSNSIAKNCS 294
++++ DT + D EG + Y+ +M+ + IA+ +
Sbjct: 257 KTVSQDTNIPIYAQIFTDSIAEQGKEG-DSYYSMMKYNLDKIAEGLA 302