RPSBLAST alignment for GI: 254780718 and conserved domain: TIGR01257

>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272

 Score = 46.5 bits (110), Expect = 5e-06
 Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 16/170 (9%)

Query: 33   IKPNEIVTLIGPNGSGKSTIAKLITGIIKPTIGSVKRHPQLIV----------GYVPQKV 82
            ++P E   L+G NG+GK+T  K++TG    T G      + I+          GY PQ  
Sbjct: 1962 VRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISDVHQNMGYCPQFD 2021

Query: 83   TIENTLP--LSLMRFMTL-SMPSSRDDVLQ--ILDRVNLIGKYNRNIKDLSGGEFQRALL 137
             I++ L     L  +  L  +P+   + +    +  + L    +R     SGG  ++   
Sbjct: 2022 AIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLAGTYSGGNKRKLST 2081

Query: 138  AKALLRKPNLLVLDEPLQGIDFPGELSLYELITSVRQSTGCGILLISHNL 187
            A AL+  P L++LDEP  G+D      L+  I S+ +  G  ++L SH++
Sbjct: 2082 AIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIRE-GRAVVLTSHSM 2130