RPSBLAST alignment for GI: 254780718 and conserved domain: TIGR03415
>gnl|CDD|132456 TIGR03415, ABC_choXWV_ATP, choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines. Length = 382
Score = 50.2 bits (120), Expect = 5e-07
Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 39/229 (17%)
Query: 28 DINFTIKPNEIVTLIGPNGSGKSTIAKLITGIIKPTIGSV-------------------K 68
+ + I+ EI L+G +GSGKS++ + + G+ + GSV +
Sbjct: 42 NASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLR 101
Query: 69 RHPQLIVGYVPQK------VTIENTLPLSL-MRFMTLSMPSSRDDVLQILDRVNLIGKYN 121
R V V QK +T+E + L M+ M R V + L+ V L +
Sbjct: 102 RLRTHRVSMVFQKFALMPWLTVEENVAFGLEMQGM--PEAERRKRVDEQLELVGLAQWAD 159
Query: 122 RNIKDLSGGEFQRALLAKALLRKPNLLVLDEPLQGID--FPGELS--LYELITSVRQSTG 177
+ +LSGG QR LA+A ++L++DEP +D +L L EL + ++
Sbjct: 160 KKPGELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKT-- 217
Query: 178 CGILLISHNLHMVMA-STDTVICLNNRICYQGPPQTI--KDNAEYIRLF 223
I+ +SH+L + I RI G P+ I +Y+ F
Sbjct: 218 --IIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVADF 264