RPSBLAST alignment for GI: 254780718 and conserved domain: TIGR03411
>gnl|CDD|163251 TIGR03411, urea_trans_UrtD, urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. Length = 242
Score = 87.2 bits (217), Expect = 4e-18
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 33/221 (14%)
Query: 9 PLISLSNTSFHKNGYKILQDINFTIKPNEIVTLIGPNGSGKSTIAKLITGIIKPTIGSVK 68
P++ L S +G+K L D++ + P E+ +IGPNG+GK+T+ +ITG +P GSV
Sbjct: 1 PILYLEGLSVSFDGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVL 60
Query: 69 -------RHP-----QLIVGYVPQKVTI-ENTLPLSLMRFMTLSMPSSR----------- 104
P + +G QK T+ EN L++ + L++P +
Sbjct: 61 FGGTDLTGLPEHQIARAGIGRKFQKPTVFEN---LTVFENLELALPRDKSVFASLFFRLS 117
Query: 105 ----DDVLQILDRVNLIGKYNRNIKDLSGGEFQRALLAKALLRKPNLLVLDEPLQGIDFP 160
D + ++L+ + L + +R LS G+ Q + L++ P LL+LDEP+ G+
Sbjct: 118 AEEKDRIEEVLETIGLADEADRLAGLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDE 177
Query: 161 GELSLYELITSVRQSTGCGILLISHNLHMVMASTDTVICLN 201
EL+ S+ ++++ H++ V + D V L+
Sbjct: 178 ETEKTAELLKSLAG--KHSVVVVEHDMEFVRSIADKVTVLH 216