RPSBLAST alignment for GI: 254780718 and conserved domain: cd03222
>gnl|CDD|72981 cd03222, ABC_RNaseL_inhibitor, The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.. Length = 177
Score = 64.2 bits (156), Expect = 3e-11
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 44/166 (26%)
Query: 33 IKPNEIVTLIGPNGSGKSTIAKLITGIIKPTIGSVKRHPQLIVGYVPQKVTIENTLPLSL 92
+K E++ ++GPNG+GK+T K++ G + P + + + Y PQ +
Sbjct: 22 VKEGEVIGIVGPNGTGKTTAVKILAGQLIPNGDNDE-WDGITPVYKPQYI---------- 70
Query: 93 MRFMTLSMPSSRDDVLQILDRVNLIGKYNRNIKDLSGGEFQRALLAKALLRKPNLLVLDE 152
DLSGGE QR +A ALLR + DE
Sbjct: 71 ---------------------------------DLSGGELQRVAIAAALLRNATFYLFDE 97
Query: 153 PLQGIDFPGELSLYELITSVRQSTGCGILLISHNLHMVMASTDTVI 198
P +D L+ I + + L++ H+L ++ +D +
Sbjct: 98 PSAYLDIEQRLNAARAIRRLSEEGKKTALVVEHDLAVLDYLSDRIH 143