RPSBLAST alignment for GI: 254780718 and conserved domain: cd03228
>gnl|CDD|72987 cd03228, ABCC_MRP_Like, The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 171
Score = 107 bits (270), Expect = 2e-24
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 53/207 (25%)
Query: 11 ISLSNTSFH--KNGYKILQDINFTIKPNEIVTLIGPNGSGKSTIAKLITGIIKPTIGSVK 68
I N SF +L+D++ TIKP E V ++GP+GSGKST+ KL+ + PT G +
Sbjct: 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEIL 60
Query: 69 RHPQLI-----------VGYVPQKVTIENTLPLSLMRFMTLSMPSSRDDVLQILDRVNLI 117
+ + YVPQ +
Sbjct: 61 IDGVDLRDLDLESLRKNIAYVPQDPFL--------------------------------- 87
Query: 118 GKYNRNIKD--LSGGEFQRALLAKALLRKPNLLVLDEPLQGIDFPGELSLYELITSVRQS 175
++ I++ LSGG+ QR +A+ALLR P +L+LDE +D E + E + ++ +
Sbjct: 88 --FSGTIRENILSGGQRQRIAIARALLRDPPILILDEATSALDPETEALILEALRALAK- 144
Query: 176 TGCGILLISHNLHMVMASTDTVICLNN 202
G +++I+H L + + D +I L++
Sbjct: 145 -GKTVIVIAHRLSTIRDA-DRIIVLDD 169