RPSBLAST alignment for GI: 254780718 and conserved domain: cd03245
>gnl|CDD|73004 cd03245, ABCC_bacteriocin_exporters, ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.. Length = 220
Score = 99.9 bits (249), Expect = 6e-22
Identities = 74/227 (32%), Positives = 110/227 (48%), Gaps = 38/227 (16%)
Query: 11 ISLSNTSFHKNGYKI--LQDINFTIKPNEIVTLIGPNGSGKSTIAKLITGIIKPTIGSV- 67
I N SF +I L +++ TI+ E V +IG GSGKST+ KL+ G+ KPT GSV
Sbjct: 3 IEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVL 62
Query: 68 -------KRHPQLI---VGYVPQKVTIENTLPLSLMRFMTLSMPSSRDDVLQILDRVNLI 117
+ P + +GYVPQ VT+ +L +TL P + D+ +IL L
Sbjct: 63 LDGTDIRQLDPADLRRNIGYVPQDVTLFYG---TLRDNITLGAPLADDE--RILRAAELA 117
Query: 118 G----------KYNRNIKD----LSGGEFQRALLAKALLRKPNLLVLDEPLQGIDFPGEL 163
G + I + LSGG+ Q LA+ALL P +L+LDEP +D E
Sbjct: 118 GVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEE 177
Query: 164 SLYE-LITSVRQSTGCGILLISHNLHMVMASTDTVICLNN-RICYQG 208
L E L + T +++I+H + + D +I +++ RI G
Sbjct: 178 RLKERLRQLLGDKT---LIIITHRPSL-LDLVDRIIVMDSGRIVADG 220