HHsearch alignment for GI: 254780719 and conserved domain: COG4120

>COG4120 ABC-type uncharacterized transport system, permease component [General function prediction only].
Probab=93.12  E-value=0.49  Score=23.75  Aligned_cols=229  Identities=16%  Similarity=0.166  Sum_probs=109.2

Q ss_pred             HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHCCHHHH---HHHHHHHHHHHHHHHHCCCC
Q ss_conf             99999999999987--88999999879996435899999999999---995003667---99999999999986310357
Q gi|254780719|r    8 RALFSGIGIVLSTG--PLGCFIIWQRIAYFGDTIAHSALLGVALS---LIFQLPLTI---CIFMIATLTSLVLLQIQKNE   79 (260)
Q Consensus         8 ~all~~~~~~~~~~--~lG~~vv~rr~s~~~~alsH~a~~Gial~---~~l~~~~~~---ga~~~~~l~al~i~~l~~~~   79 (260)
T Consensus         4 ~~l~~aleqgLi~~~v~LGvyisFRiLnFPDLTvdGsfpLGaAv~a~li~~G~nP~~at~~a~~AG~~aG~it~~l~~k~   83 (293)
T COG4120           4 FILIGALEQGLIFAFVALGVYISFRILNFPDLTVDGSFPLGAAVAATLIAAGVNPFLATLVAMVAGAAAGMITGLLNVKF   83 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             89999999989999999978613554068875315751050999999998168779999999998789899999999722


Q ss_pred             CCHHHHHHHHHHHHH--HHHHHHHHHHCCCCH----HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-----HHH
Q ss_conf             650456999999999--999999996213200----133344333244228767058999989999999842-----456
Q gi|254780719|r   80 ALSSDAILGVITHST--ISLALVILSFMKWVN----TDLTSFLFGDILAVNTTDILLIWGIGFLNIMILFKI-----WKP  148 (260)
Q Consensus        80 ~~~~da~igi~~s~~--~alg~llls~~~~~~----~~l~~~LfG~il~v~~~dv~~~~~~~~~~~~~l~~~-----~r~  148 (260)
T Consensus        84 kI~~--LLAgIL~M~alySVNLrIMg-rpNl~ll~~~ti~~~l~~~~~~~~~~~pli~~vlvii~~~~v~~fl~t~~Gla  160 (293)
T COG4120          84 KILT--LLAGILTMIALYSVNLRIMG-RPNLPLLGEDTIFTPLPFDGLLDYLLRPLILVVLVIIAKLLVIRFLKTDLGLA  160 (293)
T ss_pred             CHHH--HHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf             2877--99999999999988899855-89965368986335355456622577879999999999999999973453622


Q ss_pred             HHHHCCCHHHHHHCCCCCCHHHHHHHHH----HHHHHHHHHHHH---------HHHHH--HHHHHHHHHHHHHHHCCHHH
Q ss_conf             6541288899998089810677699999----999999999998---------89999--99999999999974199899
Q gi|254780719|r  149 LLATTVNYELAKAEGMQPEKIKLIFIMI----TSLMISVSIKFI---------GITLI--TSLLILPTVTARRFSTSPEN  213 (260)
Q Consensus       149 l~~~~fD~~~A~~~Gi~v~~~~~l~~~l----~al~v~~~v~~v---------G~llv--~allv~Paa~A~~l~~~~~~  213 (260)
T Consensus       161 lrAtG~N~~Ma~a~Gi~t~~~~~~Gl~lSNalvAl~GAL~AQ~~GfADVsmGiG~iVvGLAavIIG----e~i~~~r~~~  236 (293)
T COG4120         161 LRATGDNPDMARAQGINTERYTILGLALSNALVALAGALFAQTNGFADVSMGIGTIVVGLAAVIIG----ETIFGSRRLL  236 (293)
T ss_pred             EECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHH----HHHHHHHHHH
T ss_conf             101279877999839872568999899988899985668887436530025744245456799977----9887455899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             999999999999999999999955880899
Q gi|254780719|r  214 MAILATIIGILGIIIGLYGSLIFDTPSGPS  243 (260)
Q Consensus       214 ~~~~s~~~g~~~~~~G~~lS~~~~lp~g~~  243 (260)
T Consensus       237 ~~lla~viGsI~Yr~~i~~~L~~Gl~~sdL  266 (293)
T COG4120         237 LALLAVVIGSILYRFAIALALSSGLDASDL  266 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf             999999999999999999999859986777