HHsearch alignment for GI: 254780719 and conserved domain: PRK09478
>PRK09478 mglC beta-methylgalactoside transporter inner membrane component; Provisional.
Probab=95.54 E-value=0.13 Score=26.87 Aligned_cols=71 Identities=20% Similarity=0.193 Sum_probs=45.4
Q ss_pred HHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 4245665412888999980898106776999999999999999988999999999999999974199899999999999
Q gi|254780719|r 144 KIWKPLLATTVNYELAKAEGMQPEKIKLIFIMITSLMISVSIKFIGITLITSLLILPTVTARRFSTSPENMAILATIIG 222 (260)
Q Consensus 144 ~~~r~l~~~~fD~~~A~~~Gi~v~~~~~l~~~l~al~v~~~v~~vG~llv~allv~Paa~A~~l~~~~~~~~~~s~~~g 222 (260)
T Consensus 205 ~~Gr~lyAvG~N~~AA~~sGI~v~r~~i~~y~lsG~~aal----aGil~~-~r~~--s-~~~~~G~~~el~aIaAvviG 275 (336)
T PRK09478 205 RFGKNIFAIGGNPEAAKVSGVNVALNLLMIYALSGVFYAF----GGMLEA-GRIG--S-ATNNLGFMYELDAIAACVVG 275 (336)
T ss_pred HHHEEEEECCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHH----HHHHHH-HHHC--C-CCCCCCCCHHHHHHHHHHHC
T ss_conf 5433634645989999882898401330899888999999----999999-9848--8-38265753478999999975