HHsearch alignment for GI: 254780719 and conserved domain: PRK09512

>PRK09512 rbsC ribose ABC transporter permease protein; Reviewed.
Probab=96.02  E-value=0.083  Score=27.98  Aligned_cols=136  Identities=15%  Similarity=0.151  Sum_probs=69.9

Q ss_pred             HHHHHHHHHHCCH-HHHHHHHHHHHHHHHH----HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HCCCCH----H--H
Q ss_conf             9999999995003-6679999999999998----6310357650456999999999999999996-213200----1--3
Q gi|254780719|r   44 LLGVALSLIFQLP-LTICIFMIATLTSLVL----LQIQKNEALSSDAILGVITHSTISLALVILS-FMKWVN----T--D  111 (260)
Q Consensus        44 ~~Gial~~~l~~~-~~~ga~~~~~l~al~i----~~l~~~~~~~~da~igi~~s~~~alg~llls-~~~~~~----~--~  111 (260)
T Consensus        82 l~~~~~~~l~~~~~~~~lai~~~l~~G~~~G~iNG~lV~~~~ip~--~I~TLgt~~i~~Gl~~~~t~g~~i~~~~~~~~~  159 (321)
T PRK09512         82 LTGAVAASIVGIEVNALVAVPAALALGAAIGAVTGVIVAKGKVQA--FIATLVMMLLLRGVTMVYTDGSPINTGFTDNAD  159 (321)
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH--HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
T ss_conf             999999998436897899999999999999999858776336777--999999999999999998299212467764358


Q ss_pred             -HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             -3344333244228767058999989999999--8424566541288899998089810677699999999999
Q gi|254780719|r  112 -LTSFLFGDILAVNTTDILLIWGIGFLNIMIL--FKIWKPLLATTVNYELAKAEGMQPEKIKLIFIMITSLMIS  182 (260)
Q Consensus       112 -l~~~LfG~il~v~~~dv~~~~~~~~~~~~~l--~~~~r~l~~~~fD~~~A~~~Gi~v~~~~~l~~~l~al~v~  182 (260)
T Consensus       160 ~~~~~~~g~~~gip~~-~~i~i~v~ii~~~~l~~T~~Gr~lyAiG~N~~AA~~sGI~v~r~~i~~f~lsg~lag  232 (321)
T PRK09512        160 LFGWFGIGRPLGVPTP-VWIMAIVFAAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLAA  232 (321)
T ss_pred             HHHHHHCCCCCCCHHH-HHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHCCCCCEEEEEHHHHHHHHHH
T ss_conf             9999743651565699-999999999999999866887488797798999998098851488747999999999