HHsearch results for GI: 254780719 and protein with PDBid: 2qi9_A
>2qi9_A Vitamin B12 import system permease protein BTUC; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_A*
Probab=99.90 E-value=1.1e-21 Score=135.28 Aligned_cols=247 Identities=14% Similarity=0.121 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH------HHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 999999999878899----9999879996435899999999999995003------667999999999999863103576
Q gi|254780719|r 11 FSGIGIVLSTGPLGC----FIIWQRIAYFGDTIAHSALLGVALSLIFQLP------LTICIFMIATLTSLVLLQIQKNEA 80 (260)
Q Consensus 11 l~~~~~~~~~~~lG~----~vv~rr~s~~~~alsH~a~~Gial~~~l~~~------~~~ga~~~~~l~al~i~~l~~~~~ 80 (260)
+++++.|...+.-|. ....+=.+----++++.+..|++++..++.. ....++..+...........+++.
T Consensus 61 l~a~l~Ga~LavsG~~lQ~~~rNpLA~P~iLGissGA~lg~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 140 (326)
T 2qi9_A 61 LAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLSAIAGALIITLILLRFARRHL 140 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSCCGGGGTHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999579887840222201699999999996302678999999999999999999998853556
Q ss_pred CHH-HHHHHHHHHHHHHHHHHH-HHHCC-CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf 504-569999999999999999-96213-200133344333244228767058999989999999842456654128889
Q gi|254780719|r 81 LSS-DAILGVITHSTISLALVI-LSFMK-WVNTDLTSFLFGDILAVNTTDILLIWGIGFLNIMILFKIWKPLLATTVNYE 157 (260)
Q Consensus 81 ~~~-da~igi~~s~~~alg~ll-ls~~~-~~~~~l~~~LfG~il~v~~~dv~~~~~~~~~~~~~l~~~~r~l~~~~fD~~ 157 (260)
.+. -...|+..+..++....+ ....+ +...++..|+.||....+|+|++........ ........|+++..+.|||
T Consensus 141 ~~~~liL~Gi~i~~~~~a~~~~l~~~~~~~~~~~~~~w~~Gs~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~l~lG~~ 219 (326)
T 2qi9_A 141 STSRLLLAGVALGIISSALMTWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPV-LLWISSQSRPMNMLALGEI 219 (326)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHTCCCTTCCGGGHHHHTTTHHH-HHHHTTCHHHHHHHHTCHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCHH
T ss_conf 505889999999999999999999816899999999997347778874677889999999-9999999988777636849
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH---
Q ss_conf 99980898106776999999999999999988999999999999999974199899999999999999999999999---
Q gi|254780719|r 158 LAKAEGMQPEKIKLIFIMITSLMISVSIKFIGITLITSLLILPTVTARRFSTSPENMAILATIIGILGIIIGLYGSL--- 234 (260)
Q Consensus 158 ~A~~~Gi~v~~~~~l~~~l~al~v~~~v~~vG~llv~allv~Paa~A~~l~~~~~~~~~~s~~~g~~~~~~G~~lS~--- 234 (260)
.|++.|+|+++.+...+.+.++.++.++..+|.+.+.+ ++.|+.+.+...+++|..++.|.++|.........++.
T Consensus 220 ~A~sLGv~v~~~r~~~l~~~~ll~a~~va~~G~I~FvG-Li~PhiaR~~~g~~~~~~l~~s~l~Ga~lll~aD~i~r~i~ 298 (326)
T 2qi9_A 220 SARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIG-LVIPHILRLSGLTDHRVLLPGCALAGASALLLADIVARLAL 298 (326)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSST-THHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH-HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 88867985899889988688999999998515699999-98999999862777436999999999999999999996614
Q ss_pred -HHCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf -95588089999999999999987239
Q gi|254780719|r 235 -IFDTPSGPSIIITSLFLFILSFFYKK 260 (260)
Q Consensus 235 -~~~lp~g~~Iv~~~~~~f~~~~~~~k 260 (260)
..++|.|-.+.++.+..|+ .++.||
T Consensus 299 ~p~eiPvGvitaliG~P~fi-~Ll~r~ 324 (326)
T 2qi9_A 299 AAAELPIGVVTATLGAPVFI-WLLLKA 324 (326)
T ss_dssp TTCCCCHHHHHHHHHHHHHH-HHHSCC
T ss_pred CCCCCHHHHHHHHHHHHHHH-HHHHHC
T ss_conf 66542199999999999999-977204