RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780719|ref|YP_003065132.1| zinc uptake ABC transporter, permease protein [Candidatus Liberibacter asiaticus str. psy62] (260 letters) >1bvp_1 Bluetongue virus coat protein VP7; trimer; 2.60A {Bluetongue virus 10} (1:120-258) Length = 139 Score = 25.6 bits (56), Expect = 6.2 Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 2/32 (6%) Query: 22 PLGCFIIWQRIAYFGDTIAHS--ALLGVALSL 51 P+ +++W+RI F +S GV +S+ Sbjct: 62 PMMIYLVWRRIENFAMAQGNSQQTQAGVTVSV 93 >2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A* (A:36-258,A:310-335) Length = 249 Score = 25.7 bits (55), Expect = 7.2 Identities = 5/47 (10%), Positives = 15/47 (31%) Query: 181 ISVSIKFIGITLITSLLILPTVTARRFSTSPENMAILATIIGILGII 227 + ++ F + +P + A + MA + + + Sbjct: 5 VDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAV 51 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.331 0.145 0.424 Gapped Lambda K H 0.267 0.0624 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 1,792,775 Number of extensions: 71193 Number of successful extensions: 205 Number of sequences better than 10.0: 1 Number of HSP's gapped: 201 Number of HSP's successfully gapped: 22 Length of query: 260 Length of database: 4,956,049 Length adjustment: 87 Effective length of query: 173 Effective length of database: 2,015,014 Effective search space: 348597422 Effective search space used: 348597422 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 54 (24.8 bits)