HHsearch alignment for GI: 254780720 and conserved domain: cd00904
>cd00904 Ferritin Ferritin iron storage proteins. Ferritins are the primary iron storage proteins of most living organisms and members of a broad superfamily of ferritin-like diiron-carboxylate proteins. The iron-free (apoferritin) ferritin molecule is a protein shell composed of 24 protein chains arranged in 432 symmetry. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the dinuclear ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite; the protein shell can hold up to 4500 iron atoms. In vertebrates, two types of chains (subunits) have been characterized, H or M (fast) and L (slow), which differ in rates of iron uptake and mineralization. Bacterial non-heme ferritins are composed only of H chains. Fe(II) oxidation in the H/M subunits take place initially at the ferroxidase center, a carboxylate-bridged diiron center, located within the subunit four-helix bundle. In a complementary rol
Probab=100.00 E-value=0 Score=303.24 Aligned_cols=154 Identities=25% Similarity=0.369 Sum_probs=148.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC-C
Q ss_conf 989999999999999999999999999981--5994789999999999999999999999995399714378225720-4
Q gi|254780720|r 2 TNTRDRVLNELMNMEYVAQYHYMQAAAWAA--SHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFSSIEAPVI-S 78 (164)
Q Consensus 2 s~~~~~~Ln~qi~~El~as~~Yl~~a~~~~--~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~-~ 78 (164)
T Consensus 1 S~~~~~alN~qIn~El~as~~Yl~ma~~f~~~~~~l~Gfa~ff~~~a~EE~~Ha~~l~~Yl~~RGg~v~~~~i~~p~~~~ 80 (160)
T cd00904 1 SEKVEAAVNRQLNLELYASYTYLSMATYFDRDDVALKGVAHFFKEQAQEEREHAEKFYKYQNERGGRVELQDIEKPPSDE 80 (160)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC
T ss_conf 97999999999999999999999999996514567476999999999999999999999999779923348867888877
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCC--CCCHHHHHHHH
Q ss_conf 8898999999999999999999999999997099889999999-99999999999999999999528--87516999999
Q gi|254780720|r 79 ANDVEGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQW-FVKEQHEEMALFRRILDKIRLIG--SGPHSRYMFDL 155 (164)
Q Consensus 79 ~~~~~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~-fl~EQ~eee~~~~~ll~~l~~~g--~~~~glyl~D~ 155 (164)
T Consensus 81 ~~s~~~~~~~al~~Ek~vt~~i~~L~~~A~~~~D~~~~~fLe~~Fv~eQ~ee~~~~~~~l~~l~~~g~~~~glg~ylfDk 160 (160)
T cd00904 81 WGGTLDAMEAALKLEKFVNQALLDLHELASEEKDPHLCDFLESHFLDEQVKEIKQVGDILTNLERLNGQQAGSGEYLFDR 160 (160)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
T ss_conf 79889999999999999999999999999886997599887165379999999999999999998089998703410086