HHsearch alignment for GI: 254780720 and conserved domain: cd01052
>cd01052 DPSL DPS-like protein, ferritin-like diiron-binding domain. DPSL (DPS-like). DPSL is a phylogenetically distinct class within the ferritin-like superfamily, and similar in many ways to the DPS (DNA Protecting protein under Starved conditions) proteins. Like DPS, these proteins are expressed in response to oxidative stress, form dodecameric cage-like particles, preferentially utilize hydrogen peroxide in the controlled oxidation of iron, and possess a short N-terminal extension implicated in stabilizing cellular DNA. This domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. These proteins are distantly related to bacterial ferritins which assemble 24 monomers, each of which have a four-helix bundle with a fifth shorter helix at the C terminus and a diiron (ferroxidase) center. Ferritins contain a center where oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical
Probab=99.92 E-value=4.9e-23 Score=159.70 Aligned_cols=134 Identities=19% Similarity=0.218 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC---------
Q ss_conf 89999999999999999999999999981599478999999999999999999999999539971437822---------
Q gi|254780720|r 3 NTRDRVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFSSIE--------- 73 (164)
Q Consensus 3 ~~~~~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~i~--------- 73 (164)
T Consensus 5 ~~vIe~LN~aL~~El~ai~qY~~~a~~~~g~~~~~l~~~~~e~a~eE~~HA~~laeRI~~LgG~P~~~~~~~~~~~~~~~ 84 (148)
T cd01052 5 DELIELLNKAFADEWLAYYYYTILAKHVKGPEGEGIKEELEEAAEEELNHAELLAERIYELGGTPPRDPKDWYEISGCKC 84 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC
T ss_conf 99999999999999999999999999982888068999999998999999999999999859958988889999803656
Q ss_pred -CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -5720488989999999999999999999999999970998899999999999999999999999
Q gi|254780720|r 74 -APVISANDVEGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKEQHEEMALFRRIL 137 (164)
Q Consensus 74 -~p~~~~~~~~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~EQ~eee~~~~~ll 137 (164)
T Consensus 85 ~~~~~~~~dv~emL~~~l~~E~~AI~~Y~e~i~~~~~-~D~~t~~l~~~IL~dEeeH~~~le~lL 148 (148)
T cd01052 85 GYLPPDPPDVKGILKVNLKAERCAIKVYKELCDMTHG-KDPVTYDLALAILNEEIEHEEDLEELL 148 (148)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 6788887779999999999999999999999999878-998999999999999998999999769