HHsearch alignment for GI: 254780720 and conserved domain: pfam03232
>pfam03232 COQ7 Ubiquinone biosynthesis protein COQ7. Members of this family contain two repeats of about 90 amino acids, that contains two conserved motifs. One of these DXEXXH may be part of an enzyme active site.
Probab=96.24 E-value=0.094 Score=30.36 Aligned_cols=117 Identities=14% Similarity=0.088 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCC-----------CCH
Q ss_conf 999999999999999981599478999999999999999999999999539971437822572048-----------898
Q gi|254780720|r 14 NMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFSSIEAPVISA-----------NDV 82 (164)
Q Consensus 14 ~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~~~-----------~~~ 82 (164)
T Consensus 12 AGE~gAv~IY~GQ~a~~~~--~~~~~~~~~~~~~~E~~HL~~f~~~l~e~~~Rps~l---~PlW~~~gf~lG~~~al~G~ 86 (171)
T pfam03232 12 AGELGAVRIYAGQLAVLGP--RPSLGPLIKEMWDQEKVHLATFNELIAERRVRPTLL---LPLWHVAGFALGAGTALLGK 86 (171)
T ss_pred CHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH---HHHHHHHHHHHHHHHHHCCC
T ss_conf 3389999999999999789--978999999999999999999998889829998406---77799989999999873377
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999--709988999999999999999999999
Q gi|254780720|r 83 EGLFSLMYEHENKVTIAYDDAIETIL--AEKDHQTFQFLQWFVKEQHEEMALFRR 135 (164)
Q Consensus 83 ~e~~~~al~~E~~vt~~~~~l~~~A~--~~~D~~t~~fl~~fl~EQ~eee~~~~~ 135 (164)
T Consensus 87 ~~~~a~t~aVE~~V~~Hy~~Qi~~L~~~~~~d~~l~~~l~~~~~dE~~H~~~A~~ 141 (171)
T pfam03232 87 KAAMACTAAVETVIGEHYNDQLRELEELEEDDKELKETIAKFRDEELEHRDTAIE 141 (171)
T ss_pred CEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6124005999999999999999998617833299999999999889999999998