HHsearch results for GI: 254780720 and protein with PDBid: 1krq_A
>1krq_A Ferritin; H-chain like four-helix bundle, metal binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1
Probab=100.00 E-value=0 Score=308.90 Aligned_cols=163 Identities=36% Similarity=0.600 Sum_probs=160.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCC
Q ss_conf 99899999999999999999999999999815994789999999999999999999999995399714378225720488
Q gi|254780720|r 1 MTNTRDRVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFSSIEAPVISAN 80 (164)
Q Consensus 1 ~s~~~~~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~~~~ 80 (164)
||++|.++||+||+.|++||++|++||+||+++|+||||+||+.+|.|||+||.+|++||+.|||.|.+++|++|+..|.
T Consensus 2 ~~~~v~~~Ln~qi~~El~as~~Yl~~a~~~~~~~l~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~~~~ 81 (167)
T 1krq_A 2 LSKEVVKLLNEQINKEMYAANLYLSMSSWCYENSLDGAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQPEQNFK 81 (167)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCCCCCCCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 96899999999999999999999999999856781789999999989999999999999997388862588778776679
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 98999999999999999999999999997099889999999999999999999999999995288751699999999965
Q gi|254780720|r 81 DVEGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKEQHEEMALFRRILDKIRLIGSGPHSRYMFDLEIEKI 160 (164)
Q Consensus 81 ~~~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~EQ~eee~~~~~ll~~l~~~g~~~~glyl~D~~l~~~ 160 (164)
++.++|+.++++|+.||+.|++++++|.+.+|++|.+||+|||.||+++++++++++++++++|++|.|+|+||++|+++
T Consensus 82 s~~e~l~~al~~E~~v~~~~~~l~~~A~~~~D~~t~~fl~~fl~eQ~ee~~~l~~~l~~l~~~~~~g~~~yl~D~~l~~~ 161 (167)
T 1krq_A 82 SLLDVFEKTYEHEQFITKSINTLVEHMLTHKDYSTFNFLQWYVSEQHEEEALFRGIVDKIKLIGEHGNGLYLADQYIKNI 161 (167)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHCSTTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 88999999999999999999999999987698518999999999999999999999999998477520899999999887
Q ss_pred HCC
Q ss_conf 318
Q gi|254780720|r 161 ANK 163 (164)
Q Consensus 161 ~~~ 163 (164)
+.+
T Consensus 162 ~~s 164 (167)
T 1krq_A 162 ALS 164 (167)
T ss_dssp HHC
T ss_pred HHC
T ss_conf 542