HHsearch results for GI: 254780720 and protein with PDBid: 1krq_A

>1krq_A Ferritin; H-chain like four-helix bundle, metal binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1
Probab=100.00  E-value=0  Score=308.90  Aligned_cols=163  Identities=36%  Similarity=0.600  Sum_probs=160.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCC
Q ss_conf             99899999999999999999999999999815994789999999999999999999999995399714378225720488
Q gi|254780720|r    1 MTNTRDRVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFSSIEAPVISAN   80 (164)
Q Consensus         1 ~s~~~~~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~~~~   80 (164)
                      ||++|.++||+||+.|++||++|++||+||+++|+||||+||+.+|.|||+||.+|++||+.|||.|.+++|++|+..|.
T Consensus         2 ~~~~v~~~Ln~qi~~El~as~~Yl~~a~~~~~~~l~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~~~~   81 (167)
T 1krq_A            2 LSKEVVKLLNEQINKEMYAANLYLSMSSWCYENSLDGAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQPEQNFK   81 (167)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCCCCCCCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             96899999999999999999999999999856781789999999989999999999999997388862588778776679


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             98999999999999999999999999997099889999999999999999999999999995288751699999999965
Q gi|254780720|r   81 DVEGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKEQHEEMALFRRILDKIRLIGSGPHSRYMFDLEIEKI  160 (164)
Q Consensus        81 ~~~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~EQ~eee~~~~~ll~~l~~~g~~~~glyl~D~~l~~~  160 (164)
                      ++.++|+.++++|+.||+.|++++++|.+.+|++|.+||+|||.||+++++++++++++++++|++|.|+|+||++|+++
T Consensus        82 s~~e~l~~al~~E~~v~~~~~~l~~~A~~~~D~~t~~fl~~fl~eQ~ee~~~l~~~l~~l~~~~~~g~~~yl~D~~l~~~  161 (167)
T 1krq_A           82 SLLDVFEKTYEHEQFITKSINTLVEHMLTHKDYSTFNFLQWYVSEQHEEEALFRGIVDKIKLIGEHGNGLYLADQYIKNI  161 (167)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHCSTTTHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf             88999999999999999999999999987698518999999999999999999999999998477520899999999887


Q ss_pred             HCC
Q ss_conf             318
Q gi|254780720|r  161 ANK  163 (164)
Q Consensus       161 ~~~  163 (164)
                      +.+
T Consensus       162 ~~s  164 (167)
T 1krq_A          162 ALS  164 (167)
T ss_dssp             HHC
T ss_pred             HHC
T ss_conf             542