HHsearch results for GI: 254780720 and protein with PDBid: 1n1q_A

>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1
Probab=99.33  E-value=5.1e-10  Score=79.28  Aligned_cols=123  Identities=11%  Similarity=-0.002  Sum_probs=105.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC--------CCCC
Q ss_conf             89999999999999999999999999981599478999999999999999999999999539971437--------8225
Q gi|254780720|r    3 NTRDRVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFS--------SIEA   74 (164)
Q Consensus         3 ~~~~~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~--------~i~~   74 (164)
                      +.|.++||..+...+....+|..+.=.+.+.++..+..+|...+.+..+|++.+.+||..+||.|..+        .++.
T Consensus         7 ~~v~~~Ln~~lA~~~vl~~k~~~~HWnv~G~~F~~lH~~~e~~y~~~~~~~D~lAERi~~LG~~p~~~~~~~~~~s~i~~   86 (149)
T 1n1q_A            7 QLVAVLLNRQVANWVVLYVKLHNFHWNVNGPNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLEEASIKE   86 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCC
T ss_conf             99999999999999999999964000017888799999999999999999999999999859985779999986577741


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf             7204889899999999999999999999999999709988999999999999
Q gi|254780720|r   75 PVISANDVEGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKEQ  126 (164)
Q Consensus        75 p~~~~~~~~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~EQ  126 (164)
                      + ....++.+++...++.+..+...+++.++.|.+.+|+.|.++++.++.+.
T Consensus        87 ~-~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a~~~~D~~T~dll~~~~~~~  137 (149)
T 1n1q_A           87 A-TGGESAAEMVSSVVNDFVDLVGELKVARDVADEADDEATADMLDAIEAGL  137 (149)
T ss_dssp             C-CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             C-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             3-48998999999999999999999888998886768986899999999999