HHsearch results for GI: 254780720 and protein with PDBid: 1n1q_A
>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1
Probab=99.33 E-value=5.1e-10 Score=79.28 Aligned_cols=123 Identities=11% Similarity=-0.002 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC--------CCCC
Q ss_conf 89999999999999999999999999981599478999999999999999999999999539971437--------8225
Q gi|254780720|r 3 NTRDRVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFS--------SIEA 74 (164)
Q Consensus 3 ~~~~~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~--------~i~~ 74 (164)
+.|.++||..+...+....+|..+.=.+.+.++..+..+|...+.+..+|++.+.+||..+||.|..+ .++.
T Consensus 7 ~~v~~~Ln~~lA~~~vl~~k~~~~HWnv~G~~F~~lH~~~e~~y~~~~~~~D~lAERi~~LG~~p~~~~~~~~~~s~i~~ 86 (149)
T 1n1q_A 7 QLVAVLLNRQVANWVVLYVKLHNFHWNVNGPNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLEEASIKE 86 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCC
T ss_conf 99999999999999999999964000017888799999999999999999999999999859985779999986577741
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 7204889899999999999999999999999999709988999999999999
Q gi|254780720|r 75 PVISANDVEGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKEQ 126 (164)
Q Consensus 75 p~~~~~~~~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~EQ 126 (164)
+ ....++.+++...++.+..+...+++.++.|.+.+|+.|.++++.++.+.
T Consensus 87 ~-~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a~~~~D~~T~dll~~~~~~~ 137 (149)
T 1n1q_A 87 A-TGGESAAEMVSSVVNDFVDLVGELKVARDVADEADDEATADMLDAIEAGL 137 (149)
T ss_dssp C-CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred C-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 3-48998999999999999999999888998886768986899999999999