HHsearch results for GI: 254780720 and protein with PDBid: 1nnq_A
>1nnq_A Rubrerythrin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.35A {Pyrococcus furiosus} SCOP: a.25.1.1 g.41.5.1 PDB: 2hr5_A
Probab=99.48 E-value=5.7e-12 Score=91.13 Aligned_cols=127 Identities=17% Similarity=0.166 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCH
Q ss_conf 89999999999999999999999999981599478999999999999999999999999539971437822572048898
Q gi|254780720|r 3 NTRDRVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFSSIEAPVISANDV 82 (164)
Q Consensus 3 ~~~~~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~~~~~~ 82 (164)
+...+-|++.+..|.+|+..|+.+|..++.+|++.+|+.|+..|.+|+.||..++++|...| .++
T Consensus 6 ~~T~~nL~~AfagEs~A~~rY~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~l~~~~---------------~t~ 70 (171)
T 1nnq_A 6 TMTKKFLEEAFAGESMAHMRYLIFAEKAEQEGFPNIAKLFRAIAYAEFVHAKNHFIALGKLG---------------KTP 70 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCC---------------CHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---------------CCH
T ss_conf 89999999999879999999999999998878599999999999999999999999975426---------------866
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999999999709988999999999999999999999999999528
Q gi|254780720|r 83 EGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKEQHEEMALFRRILDKIRLIG 144 (164)
Q Consensus 83 ~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~EQ~eee~~~~~ll~~l~~~g 144 (164)
..+...+..-+.+.+..|.+.++.|++++|..+..++.+++.....+...+..++.+++...
T Consensus 71 ~nL~~a~~~e~~E~~~~Yp~~a~~A~eeG~~~~a~~f~~i~~~E~~H~~~~~~~l~~l~~~~ 132 (171)
T 1nnq_A 71 ENLQMGIEGETFEVEEMYPVYNKAAEFQGEKEAVRTTHYALEAEKIHAELYRKAKEKAEKGE 132 (171)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 78999998117889988999999999868799999999999999999999999998755124