HHsearch results for GI: 254780720 and protein with PDBid: 1s3q_A
>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding protein; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A
Probab=100.00 E-value=0 Score=308.84 Aligned_cols=162 Identities=30% Similarity=0.473 Sum_probs=159.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCC
Q ss_conf 99899999999999999999999999999815994789999999999999999999999995399714378225720488
Q gi|254780720|r 1 MTNTRDRVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFSSIEAPVISAN 80 (164)
Q Consensus 1 ~s~~~~~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~~~~ 80 (164)
||++|.++||+|||.|++||++|++||+||+++|+|||++||+.+|.|||+||++|++||++|||.|+++++++|+.+|.
T Consensus 4 ls~~v~~~Ln~qi~~El~as~~Yl~~a~~~~~~~l~g~a~~f~~~a~EE~~HA~~l~~yi~~rGg~~~~~~i~~p~~~~~ 83 (173)
T 1s3q_A 4 ISEKMVEALNRQINAEIYSAYLYLSMASYFDSIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEPPSEWD 83 (173)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 10999999999999999999999999999852692778999999959988899999999998599541388668765579
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 98999999999999999999999999997099889999999999999999999999999995288751699999999965
Q gi|254780720|r 81 DVEGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKEQHEEMALFRRILDKIRLIGSGPHSRYMFDLEIEKI 160 (164)
Q Consensus 81 ~~~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~EQ~eee~~~~~ll~~l~~~g~~~~glyl~D~~l~~~ 160 (164)
++.++|+.+|++|+.|++.|++++++|.+.+|++|.+||+||+.||+++++++++++++++++|++|.|+|+||++|+++
T Consensus 84 ~~~e~l~~aL~~E~~v~~~~~~l~~~a~~~~D~~t~~fl~~~l~eQ~ee~~~l~~~i~~l~~~g~~~~~lyl~D~~L~~~ 163 (173)
T 1s3q_A 84 SPLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNFLQWYVAEQVEEEASALDIVEKLRLIGEDKRALLFLDKELSLR 163 (173)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
T ss_conf 99999999999999999999999999987588859999998599999999999999999998178741598999999727
Q ss_pred HC
Q ss_conf 31
Q gi|254780720|r 161 AN 162 (164)
Q Consensus 161 ~~ 162 (164)
..
T Consensus 164 ~~ 165 (173)
T 1s3q_A 164 QF 165 (173)
T ss_dssp C-
T ss_pred CC
T ss_conf 88