HHsearch results for GI: 254780720 and protein with PDBid: 2c41_A

>2c41_A DPS family DNA-binding stress response protein; iron-binding/oxidation protein, DPS (DNA-binding proteins from starved cells); HET: PG4 PGE; 1.81A {Thermosynechococcus elongatus}
Probab=99.35  E-value=3.9e-10  Score=80.00  Aligned_cols=123  Identities=9%  Similarity=0.018  Sum_probs=109.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC--------CC
Q ss_conf             9899999999999999999999999999815994789999999999999999999999995399714378--------22
Q gi|254780720|r    2 TNTRDRVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFSS--------IE   73 (164)
Q Consensus         2 s~~~~~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~--------i~   73 (164)
                      .+++.+.||..+..++....+|..+.-...+.++..+..+|...+.+.++|++.+.+||..+||.|....        ++
T Consensus         8 ~~~~~~~Ln~~lA~~~~l~~~~~~~HWnv~G~~F~~lH~~~~~~y~~~~~~~D~iAERi~~LGg~p~~~~~~~~~~s~~~   87 (158)
T 2c41_A            8 KEQVLTTLKREQANAVVMYLNYKKYHWLTYGPLFRDLHLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADYLKVATVT   87 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSGGGHHHHCCSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
T ss_conf             99999999999988999999997400102798879999999999999999999999999981789887899999756676


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf             5720488989999999999999999999999999970998899999999999
Q gi|254780720|r   74 APVISANDVEGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKE  125 (164)
Q Consensus        74 ~p~~~~~~~~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~E  125 (164)
                       |.....+..+++...++.+..+...+++.++.|.+.+|+.|.+++..++.+
T Consensus        88 -e~~~~~~~~~~l~~l~~~~~~~i~~~~~~~~~a~e~~D~~T~dll~~~~~~  138 (158)
T 2c41_A           88 -PSSGQLTVKQMIEEAIANHELIITEMHQDAEIATEAGDIGTADLYTRLVQT  138 (158)
T ss_dssp             -CCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             -CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             -446898889999999999999999999999998678898899999999999