HHsearch results for GI: 254780720 and protein with PDBid: 2qqy_A

>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=99.95  E-value=8.6e-27  Score=181.21  Aligned_cols=141  Identities=18%  Similarity=0.176  Sum_probs=133.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCH
Q ss_conf             89999999999999999999999999981599478999999999999999999999999539971437822572048898
Q gi|254780720|r    3 NTRDRVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFSSIEAPVISANDV   82 (164)
Q Consensus         3 ~~~~~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~~~~~~   82 (164)
                      +++.++||++++.|++|+++|+++|.||++.++++++++|+.+|.||+.||.++++||..+||.|..++  .|...+.++
T Consensus         9 ~~li~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~~~~~f~~~a~eE~~Ha~~l~~~i~~lGg~p~~~~--~~~~~~~~~   86 (149)
T 2qqy_A            9 KELIEGLNEDLAGEYSAIIMYNHNAATVSGIYRQVLKPFFESEISDEQGHALYLAEKIKTLGGTPTTIP--LRVKQAEDV   86 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCC--CCCCCCSSH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCHHHHHHH
T ss_conf             999999999999999999999999998807988999999999999999999999999987499877675--310112568


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             999999999999999999999999997099889999999999999999999999999995288
Q gi|254780720|r   83 EGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKEQHEEMALFRRILDKIRLIGS  145 (164)
Q Consensus        83 ~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~EQ~eee~~~~~ll~~l~~~g~  145 (164)
                      .++|+.+++.|+.+++.|+++++.|.+.+|+.|.++++|++.++.++...++++|++.+++.+
T Consensus        87 ~e~L~~al~~E~~~~~~y~~~~~~a~~~~D~~~~~~l~~~~~eE~~H~~~l~~~L~~~~~~~~  149 (149)
T 2qqy_A           87 REMLEYARQSEYETIKRYEKRKEQAANLNMTELVVKLEDMIADETNHMEELDRLLNDKAMVLN  149 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             999999999999999999999999988698999999999999999999999998563232369