HHsearch alignment for GI: 254780721 and conserved domain: COG2064

>COG2064 TadC Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=99.95  E-value=3.7e-23  Score=171.34  Aligned_cols=313  Identities=31%  Similarity=0.393  Sum_probs=231.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89999999999999999999999607660899999999877887654432100012456775654457899998520000
Q gi|254780721|r   12 TELAVAITTAVSIFSLIYAVVIPSLGSGELEKRMKSVAVEREILRKQQITSLQKDSASSRLRTRDSKSLRNFVKKLNLKA   91 (329)
Q Consensus        12 ~~lli~il~~i~v~~~i~~l~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (329)
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~   82 (320)
T COG2064           5 AELYLTFLVARPLFALAILVVMAVLKRKELLLLLKGVDREIPRIILLSLIRLLIGSV--SIRELLAFLLRKIISGLLLFF   82 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHH
T ss_conf             789999998999999999999998264017999987898700566899998864311--002057899999999988877


Q ss_pred             CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             12556999999967999867589999999999999999999-99999732001215899999999999999999999999
Q gi|254780721|r   92 ILVDENIVNKLRAAGFRSEYSLNILLVVRLVVPIIFLILGI-IWIFGYDKLLEYPFQLRVGAVILIGYVGFCAPSVWISN  170 (329)
Q Consensus        92 ~~~~~~l~~~L~~AG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~P~~~l~~  170 (329)
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~p~i~~~~  162 (320)
T COG2064          83 GGEDSKPRFKLVEALYRLELALPLFLFALLLALFLGVLLSLPILLLVLGSFIILPLSDFLAIALLISLLGLPLPFILFSL  162 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf             76677898889999998850340899999999999999999999999987300229999999999988144207899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHH
Q ss_conf             99999999999999999999999974996899999999840778778999999999999659998999999998639958
Q gi|254780721|r  171 LVQKRQSSIKRAWPDALDLLLICVESGISIDQALRRVAEDIGGQSVPLSEEMLLTIAELSFLPNRQVAFENFYNRTQMDC  250 (329)
Q Consensus       171 ~~~~r~~~i~~~lP~~ld~l~~~~~aG~~l~~Al~~va~e~~~~~~~l~~e~~~~~~~~~~G~~~~~Al~~~a~r~~~~~  250 (329)
T Consensus       163 ~~~~r~~~i~~~~p~~l~~~~~~~~~G~~l~~al~~va~~~~~~-~~l~~~~~~~~~~~~~g~~~~~al~~~~~~~~~~~  241 (320)
T COG2064         163 ALKKRLKEIARELPDFLRLMAVCLEAGLSLADALKRVADELYGQ-RILAEELARTTAELSLGLSIEEALIRLAVRLGSDE  241 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             99862135899889999999999882878999999998733233-88999999999998769977999999987443499


Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999997199589999999999-9999999999999843336999999999999999999779999999973
Q gi|254780721|r  251 VRNATQALIQSDRYGTSIGDSLRVLVSE-TRSERLMEAEKKAASLGPKLTVPMIIFFLPVLILVIIGPAILSIIDTMK  327 (329)
Q Consensus       251 ~~~~~~~l~~~~~~G~~l~~~L~~~a~~-~r~~~~~~~e~~a~~~~~k~~~~~il~~~p~~~~~~~~P~~~~~~~~~~  327 (329)
T Consensus       242 ~~~~~~~l~~~~~~g~~l~~~l~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~  319 (320)
T COG2064         242 VKRVVSLLTQALESGGSLADALRVLSMELSRETRLKLGEIRAGKIGVGILLPLILVIIPVLLFVVILPAILGIASSGG  319 (320)
T ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999999998833209999999999999998899998899988879999999999999999999888999998615