BLAST/PSIBLAST alignment of GI: 254780721 and GI: 116249986 at iteration 1
>gi|116249986|ref|YP_765824.1| component of pilus protein [Rhizobium leguminosarum bv. viciae 3841] Length = 328
>gi|115254634|emb|CAK05708.1| putative component of pilus protein [Rhizobium leguminosarum bv. viciae 3841] Length = 328
Score = 342 bits (876), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 170/311 (54%), Positives = 234/311 (75%), Gaps = 2/311 (0%)
Query: 16 VAITTAVSIFSLIYAVVIPSLGSGELEKRMKSVAVEREILRKQQITSLQKDSASSR--LR 73
+A+ A+++F+ Y + +P G+L KRMK+V+ ERE +R ++ + ++ + + LR
Sbjct: 16 IALLVAIAVFATFYTIAVPFFERGDLNKRMKAVSTEREQIRARERARMNTETGAGKASLR 75
Query: 74 TRDSKSLRNFVKKLNLKAILVDENIVNKLRAAGFRSEYSLNILLVVRLVVPIIFLILGII 133
+++++S+R V++ NL+ LVDEN +NKLRAAGFRSE +LN LV R ++P +FL L
Sbjct: 76 SQNNRSVRQIVERFNLRKALVDENTINKLRAAGFRSENALNTFLVARFLLPFLFLALAAF 135
Query: 134 WIFGYDKLLEYPFQLRVGAVILIGYVGFCAPSVWISNLVQKRQSSIKRAWPDALDLLLIC 193
W+FG L E +R+ AVI +GY+GF AP+++ISN + KRQ SIKRAWPDALDL+LIC
Sbjct: 136 WVFGLGNLAEKGTPIRLFAVIGVGYLGFYAPNIYISNRMGKRQHSIKRAWPDALDLMLIC 195
Query: 194 VESGISIDQALRRVAEDIGGQSVPLSEEMLLTIAELSFLPNRQVAFENFYNRTQMDCVRN 253
VESGISI+ A+RRV+E++G QS L+EEM+LT AELSFLP+R+VA EN RTQ++ VR+
Sbjct: 196 VESGISIEAAMRRVSEELGEQSPALAEEMVLTTAELSFLPDRRVALENLATRTQIELVRS 255
Query: 254 ATQALIQSDRYGTSIGDSLRVLVSETRSERLMEAEKKAASLGPKLTVPMIIFFLPVLILV 313
TQALIQ+DRYGT + +LRVL E R ER+ EAEKKAA+L PKLTVPMI+FFLPVLI V
Sbjct: 256 VTQALIQADRYGTPVAQALRVLAQEGRDERMNEAEKKAAALPPKLTVPMILFFLPVLIAV 315
Query: 314 IIGPAILSIID 324
I+GPA + + D
Sbjct: 316 ILGPAGIQVAD 326