HHsearch alignment for GI: 254780722 and conserved domain: PRK08307
>PRK08307 stage III sporulation protein SpoAB; Provisional.
Probab=96.62 E-value=0.052 Score=31.40 Aligned_cols=71 Identities=18% Similarity=0.286 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHC
Q ss_conf 9999999999999999999999956-99989999999992484289999999998630--388889999977534
Q gi|254780722|r 5 IKKRTAKFLDDFPNALDIIVRSVRA-GLPVSDAVAVIVGQSSDPVRSEFRRVIETQHL--GLSLSESISRMVRYM 76 (187)
Q Consensus 5 ~~~R~~~~~~~l~~~l~~l~~~l~a-G~sl~~Al~~~a~~~~~~l~~e~~~i~~~~~~--G~~~~~al~~~~~~~ 76 (187)
T Consensus 25 ~~~R~~qL-~~l~~~l~~L~~EI~Y~~tpL~eal~~i~~~~~~~~~~~f~~~a~~L~~~~g~s~~e~W~~~~~~~ 98 (172)
T PRK08307 25 YKERPRQL-RELKAALQSLEAEIMYGHTPLPEALENIAKKSPKPISTLFQRFAERLEKGEVETVYEAWEKSLKEN 98 (172)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 99999999-999999999999998808989999999987557339999999999987378998999999999987