HHsearch alignment for GI: 254780722 and conserved domain: PRK10573

>PRK10573 type IV pilin biogenesis protein; Provisional.
Probab=99.73  E-value=2.8e-15  Score=113.28  Aligned_cols=136  Identities=15%  Similarity=0.277  Sum_probs=118.3

Q ss_pred             HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC-HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             999999999999995699989999999992484-2899999999986303888899999775348734799999999987
Q gi|254780722|r   14 DDFPNALDIIVRSVRAGLPVSDAVAVIVGQSSD-PVRSEFRRVIETQHLGLSLSESISRMVRYMPLQEVSFFSTVISVQS   92 (187)
Q Consensus        14 ~~l~~~l~~l~~~l~aG~sl~~Al~~~a~~~~~-~l~~e~~~i~~~~~~G~~~~~al~~~~~~~~~~~~~~~~~~l~~~~   92 (187)
T Consensus        58 ~~l~~f~~qLa~ll~aGipl~~aL~~l~~~~~~~~~~~~l~~i~~~l~~G~sls~Al~~~~~~F-----p~~~~~mv~aG  132 (397)
T PRK10573         58 EQSAEIIRQLATLLQAGLPLSEGLQLLAEQHPSKQWQALLQELAHQLEQGVAFSEALLQWPHVF-----PPLYQAMIRTG  132 (397)
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC-----CHHHHHHHHHH
T ss_conf             7999999999999986999999999998537786899999999999869831899998571628-----87999999998


Q ss_pred             HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHC
Q ss_conf             42574689999999999999999999999864345677999999999999999978789999950
Q gi|254780722|r   93 QLGGNLSEALANLSRILRDRKNMKAKVQALSMEAKASAWIIGSLPFCVSTLVYFTSPGYMNVLIN  157 (187)
Q Consensus        93 ~~gg~~~~~L~~la~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~  157 (187)
T Consensus       133 E~sG~L~~~l~~la~~~e~~~~~r~ki~~Al~YP---~~l~~~~i~v~~~ll~~VvP~f~~if~~  194 (397)
T PRK10573        133 ELTGKLDECCFQLARQQEAQQQLTKKVKKALRYP---LIILAVALLVVVAMLHFVLPEFAAIYQS  194 (397)
T ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             7107799999999999999999999999999701---9999999999999999997647663134