BLAST/PSIBLAST alignment of GI: 254780722 and GI: 150398545 at iteration 1
>gi|150398545|ref|YP_001329012.1| type II secretion system protein [Sinorhizobium medicae WSM419] Length = 336
>gi|150030060|gb|ABR62177.1| type II secretion system protein [Sinorhizobium medicae WSM419] Length = 336
Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 152/183 (83%)
Query: 5 IKKRTAKFLDDFPNALDIIVRSVRAGLPVSDAVAVIVGQSSDPVRSEFRRVIETQHLGLS 64
IK+R KFLD+FPNALD++VRS+++GLP++DA+ +I +PVR+EFRRV+E+Q +GL+
Sbjct: 154 IKRRCRKFLDEFPNALDVMVRSIKSGLPLNDALRLIASDGQEPVRTEFRRVVESQQVGLN 213
Query: 65 LSESISRMVRYMPLQEVSFFSTVISVQSQLGGNLSEALANLSRILRDRKNMKAKVQALSM 124
+ E+ +RM+ +PL EV+FF+ VI++Q+Q GGNLSEAL NLS++LR+R+ MKAKV ALSM
Sbjct: 214 VPEACARMIHSIPLPEVNFFAIVIAIQAQAGGNLSEALGNLSKVLRERRKMKAKVNALSM 273
Query: 125 EAKASAWIIGSLPFCVSTLVYFTSPGYMNVLINDPRGHMLLGVAAAFMLIGIMVMRLMIN 184
EAKASA IIG+LPF V+TLVY TSP YM +L DPRGH+++G +A +M IGI +MR MIN
Sbjct: 274 EAKASACIIGALPFIVATLVYLTSPAYMAILFTDPRGHLIMGASAVWMSIGIWMMRNMIN 333
Query: 185 FDV 187
FD+
Sbjct: 334 FDI 336