BLAST/PSIBLAST alignment of GI: 254780722 and GI: 150398545 at iteration 1
>gi|150398545|ref|YP_001329012.1| type II secretion system protein [Sinorhizobium medicae WSM419] Length = 336
>gi|150030060|gb|ABR62177.1| type II secretion system protein [Sinorhizobium medicae WSM419] Length = 336
 Score =  248 bits (634), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 111/183 (60%), Positives = 152/183 (83%)

Query: 5   IKKRTAKFLDDFPNALDIIVRSVRAGLPVSDAVAVIVGQSSDPVRSEFRRVIETQHLGLS 64
           IK+R  KFLD+FPNALD++VRS+++GLP++DA+ +I     +PVR+EFRRV+E+Q +GL+
Sbjct: 154 IKRRCRKFLDEFPNALDVMVRSIKSGLPLNDALRLIASDGQEPVRTEFRRVVESQQVGLN 213

Query: 65  LSESISRMVRYMPLQEVSFFSTVISVQSQLGGNLSEALANLSRILRDRKNMKAKVQALSM 124
           + E+ +RM+  +PL EV+FF+ VI++Q+Q GGNLSEAL NLS++LR+R+ MKAKV ALSM
Sbjct: 214 VPEACARMIHSIPLPEVNFFAIVIAIQAQAGGNLSEALGNLSKVLRERRKMKAKVNALSM 273

Query: 125 EAKASAWIIGSLPFCVSTLVYFTSPGYMNVLINDPRGHMLLGVAAAFMLIGIMVMRLMIN 184
           EAKASA IIG+LPF V+TLVY TSP YM +L  DPRGH+++G +A +M IGI +MR MIN
Sbjct: 274 EAKASACIIGALPFIVATLVYLTSPAYMAILFTDPRGHLIMGASAVWMSIGIWMMRNMIN 333

Query: 185 FDV 187
           FD+
Sbjct: 334 FDI 336