BLAST/PSIBLAST alignment of GI: 254780722 and GI: 209551763 at iteration 1
>gi|209551763|ref|YP_002283680.1| type II secretion system protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 335
>gi|209537519|gb|ACI57454.1| type II secretion system protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 335
Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 153/184 (83%)
Query: 4 LIKKRTAKFLDDFPNALDIIVRSVRAGLPVSDAVAVIVGQSSDPVRSEFRRVIETQHLGL 63
LIK+R KFL++ PNALD+I RS+++GLP++DA+ +I + ++PV+SEFRRVIE Q +GL
Sbjct: 152 LIKRRQNKFLNELPNALDVITRSIKSGLPLNDAIRLIATEGTEPVKSEFRRVIEAQQVGL 211
Query: 64 SLSESISRMVRYMPLQEVSFFSTVISVQSQLGGNLSEALANLSRILRDRKNMKAKVQALS 123
S+ ++ +RM +MPLQEVSFF+ VI++QSQ GGNLSEA+ NLS+++R+R+ MKAKV ALS
Sbjct: 212 SIPDACARMTAHMPLQEVSFFAIVIAIQSQAGGNLSEAIGNLSKVIRERRKMKAKVSALS 271
Query: 124 MEAKASAWIIGSLPFCVSTLVYFTSPGYMNVLINDPRGHMLLGVAAAFMLIGIMVMRLMI 183
MEAKASA IIG+LPF V+TLVY TSP YM +L DPRGH ++GV+A +M IGI VMR M+
Sbjct: 272 MEAKASAVIIGALPFIVATLVYLTSPSYMMILFTDPRGHFIMGVSAIWMSIGIFVMRNMV 331
Query: 184 NFDV 187
NFD+
Sbjct: 332 NFDI 335