BLAST/PSIBLAST alignment of GI: 254780722 and GI: 241207161 at iteration 1
>gi|241207161|ref|YP_002978257.1| type II secretion system protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 335
>gi|240861051|gb|ACS58718.1| type II secretion system protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 335
 Score =  251 bits (642), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 114/184 (61%), Positives = 153/184 (83%)

Query: 4   LIKKRTAKFLDDFPNALDIIVRSVRAGLPVSDAVAVIVGQSSDPVRSEFRRVIETQHLGL 63
           LIK+R  KFL++ PNALD+I RS+++GLP++DA+ +I  + ++PV+SEF RVIE Q +GL
Sbjct: 152 LIKRRQTKFLNELPNALDVITRSIKSGLPLNDAIRLIATEGTEPVKSEFLRVIEAQQVGL 211

Query: 64  SLSESISRMVRYMPLQEVSFFSTVISVQSQLGGNLSEALANLSRILRDRKNMKAKVQALS 123
           S+ ++ +RM  +MPLQEV+FF+ VI++QSQ GGNLSEA+ NLS++LR+R+ MKAKVQALS
Sbjct: 212 SIPDACARMTIHMPLQEVNFFAIVIAIQSQAGGNLSEAIGNLSKVLRERRKMKAKVQALS 271

Query: 124 MEAKASAWIIGSLPFCVSTLVYFTSPGYMNVLINDPRGHMLLGVAAAFMLIGIMVMRLMI 183
           MEAKASA IIG+LPF V+TLVY TSP YM +L  DPRGH ++GV+A +M IGI VMR M+
Sbjct: 272 MEAKASAVIIGALPFIVATLVYMTSPNYMMILFTDPRGHFIMGVSAIWMSIGIFVMRNMV 331

Query: 184 NFDV 187
           NFD+
Sbjct: 332 NFDI 335