HHsearch alignment for GI: 254780723 and conserved domain: COG4965
>COG4965 TadB Flp pilus assembly protein TadB [Intracellular trafficking and secretion].
Probab=99.57 E-value=1.3e-14 Score=110.21 Aligned_cols=116 Identities=18% Similarity=0.259 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 6999999999999999999996306047789999999775420-----12205899999999999999999962237989
Q gi|254780723|r 6 SWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRV-----IPTANTKRRKELREAIQKIELNHKAKIGNTKS 80 (137)
Q Consensus 6 ~l~~~gL~~vavg~laya~~yp~ls~~~~~aqrr~~~~~a~R~-----~~~~~~kRRksvq~sLKelE~rqk~~~k~~~s 80 (137)
T Consensus 2 ~~~~~~~~~~~~~~~~~a~~~~~-~~~~r~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~------- 73 (309)
T COG4965 2 ILFYLVLAALSALLLAYAFLGWR-SKSKRARIRNRRIKAAATDLSSALALRDLSSRRLSAQDSLKRLDRKQPR------- 73 (309)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHCCCCCCHHHHHHHHCCC-------
T ss_conf 12999999999999999998488-8788988877889997733401788547023046554046667652244-------
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 899999619997899999999999999999999957118999999999974887659
Q gi|254780723|r 81 IDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRFF 137 (137)
Q Consensus 81 l~~rL~QAGL~~s~~~F~i~S~v~g~v~~~i~~i~g~~~l~a~g~a~~~glGLPRw~ 137 (137)
T Consensus 74 ------q~G~~~~~~~~~~l~~~~~l~~~~v~-~~~~~l~v~~-~~~~~~~llp~~~ 122 (309)
T COG4965 74 ------QAGLRVSLARLILLSAGAGLAVALVA-WLGLSLLVAL-VALIGAALLPRLV 122 (309)
T ss_pred ------CCCCCCCHHHHHHHHHHHHHHHHHHH-HHHCCHHHHH-HHHHHHHHHHHHH
T ss_conf ------56656647999999999999999999-9861389999-9999999999999