BLAST/PSIBLAST alignment of GI: 254780723 and GI: 153008063 at iteration 1
>gi|153008063|ref|YP_001369278.1| type II secretion system protein [Ochrobactrum anthropi ATCC 49188] Length = 337
>gi|151559951|gb|ABS13449.1| type II secretion system protein [Ochrobactrum anthropi ATCC 49188] Length = 337
 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 11/137 (8%)

Query: 12  LITVSVFCFLYAIFYNVINPGDSKSQ---------DNAKVVRADRVIPTANTKRRKELRE 62
           L  V+     YA+FY  +   D  ++             + R++R       KRRK+L++
Sbjct: 14  LAVVACAALFYALFYEKLGKKDHAARRFETVRNSGSERAITRSERDRNADIQKRRKQLQD 73

Query: 63  AIQKIELNHKAKIGNTK--SIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFF 120
            I+ +E   K +  N K   +  L++ +GL ++ Q +YI S V  F+   ++L   +   
Sbjct: 74  NIKDLEARQKQREKNQKYPPLRILLAQAGLSLTLQKFYIYSGVAAFLATFIALIFGAPLL 133

Query: 121 TFLCVSVSSALVFPRFF 137
               ++++     PR+F
Sbjct: 134 FLPGIAIAGFFGLPRWF 150