HHsearch alignment for GI: 254780724 and conserved domain: COG1341
>COG1341 Predicted GTPase or GTP-binding protein [General function prediction only].
Probab=96.30 E-value=0.037 Score=33.68 Aligned_cols=102 Identities=20% Similarity=0.253 Sum_probs=57.1
Q ss_pred HHCCCCCEEEECCCCCCHHHHHHHHHHHCCC-CCCEEEE-ECCH--HHCCCCCCEEEEEE--------------------
Q ss_conf 6225884899818888888999999830387-6767999-6421--31256787567787--------------------
Q gi|254780724|r 246 IGRIRCNVLISGGTGSGKTTLLNCLTRYIDK-DERIVTC-EDTA--ELQLQQPHVVRLET-------------------- 301 (483)
Q Consensus 246 ~v~~~~nilVsG~TGSGKTT~L~al~~~i~~-~~rivtI-ED~~--El~l~~~~~v~~~~-------------------- 301 (483)
T Consensus 69 ~~~~~~~vmvvG~vDSGKSTLt~~LaN~~l~rG~~v~iiDaDvGQ~ei~pP--g~ISL~~~~s~~~~L~~l~~~~~~FvG 146 (398)
T COG1341 69 SAGKVGVVMVVGPVDSGKSTLTTYLANKLLARGRKVAIIDADVGQSEIGPP--GFISLAFPESPVISLSELEPFTLYFVG 146 (398)
T ss_pred HCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC--CEEEEECCCCCCCCHHHCCCCCEEEEE
T ss_conf 206873899989867678899999998876447418999689997666797--467741256777777775865227985
Q ss_pred --ECCCCCCCCCCHHHHHHHHHHHCCCCEEEEC---CCCCHHHHH----HHHHHHCCC
Q ss_conf --4166665300018999987520599889965---758799999----999987397
Q gi|254780724|r 302 --RPPNIEGEGEITMRDLVKNCLRMRPERIILG---EVRGPEVLD----LLQAMNTGH 350 (483)
Q Consensus 302 --~~~~~e~~~~~t~~~ll~~aLR~~PD~IiVG---EiRg~Ea~~----~l~A~~TGH 350 (483)
T Consensus 147 ~isP~~~~~~~i~~v~rL~~~a~~~-~~~ilIdT~GWi~G~~g~elk~~li~~ikP~~ 203 (398)
T COG1341 147 SISPQGFPGRYIAGVARLVDLAKKE-ADFILIDTDGWIKGWGGLELKRALIDAIKPDL 203 (398)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCC-CCEEEECCCCCEECCHHHHHHHHHHHHCCCCE
T ss_conf 1477777689999999999986516-87799969984307427899999886509778