HHsearch alignment for GI: 254780724 and conserved domain: COG1419

Probab=97.15  E-value=0.00043  Score=47.18  Aligned_cols=117  Identities=17%  Similarity=0.209  Sum_probs=56.4

Q ss_pred             CCCCCEEEECCCCCCHHHHHHHHHHH-C--CCCCCEEEE-ECCHHHCCCCCCEEEEEEECCCCCC---CCCCHHHHHHHH
Q ss_conf             25884899818888888999999830-3--876767999-6421312567875677874166665---300018999987
Q gi|254780724|r  248 RIRCNVLISGGTGSGKTTLLNCLTRY-I--DKDERIVTC-EDTAELQLQQPHVVRLETRPPNIEG---EGEITMRDLVKN  320 (483)
Q Consensus       248 ~~~~nilVsG~TGSGKTT~L~al~~~-i--~~~~rivtI-ED~~El~l~~~~~v~~~~~~~~~e~---~~~~t~~~ll~~  320 (483)
T Consensus       201 ~~~~vi~LVGPTGVGKTTTlAKLAar~~~~~~~~kVaiITtDtYRI--GA~EQLk~Ya~im~vp~~vv~~~~el~~ai~-  277 (407)
T COG1419         201 EQKRVIALVGPTGVGKTTTLAKLAARYVMLKKKKKVAIITTDTYRI--GAVEQLKTYADIMGVPLEVVYSPKELAEAIE-  277 (407)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHH--HHHHHHHHHHHHHCCCEEEECCHHHHHHHHH-
T ss_conf             4685799989988758879999999997532576068997144115--2899999999986995599639999999999-


Q ss_pred             HHHCCCCEEEECCC-C---CHHH----HHHHHHHHCCCCEEEHHHCCCCHHHHHHHHH
Q ss_conf             52059988996575-8---7999----9999998739701020004788888999999
Q gi|254780724|r  321 CLRMRPERIILGEV-R---GPEV----LDLLQAMNTGHDGSMGTIHANNARESFGRME  370 (483)
Q Consensus       321 aLR~~PD~IiVGEi-R---g~Ea----~~~l~A~~TGH~G~ltTlHa~s~~~ai~RL~  370 (483)
T Consensus       278 ~l~~~-d~ILVDTaGrs~~D~~~i~el~~~~~~~~~i~--~~Lvlsat~K~~dlkei~  332 (407)
T COG1419         278 ALRDC-DVILVDTAGRSQYDKEKIEELKELIDVSHSIE--VYLVLSATTKYEDLKEII  332 (407)
T ss_pred             HHHCC-CEEEEECCCCCCCCHHHHHHHHHHHHCCCCCE--EEEEEECCCCHHHHHHHH
T ss_conf             85318-88999689988337899999999970356621--799984576468899999