HHsearch alignment for GI: 254780724 and conserved domain: COG4987

>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].

Probab=96.03  E-value=0.011  Score=37.44  Aligned_cols=97  Identities=22%  Similarity=0.294  Sum_probs=58.9

Q ss_pred             HHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCC---CEEEEEEECCCCCCCCCCHHHHH
Q ss_conf             998986225884899818888888999999830387676799964213125678---75677874166665300018999
Q gi|254780724|r  241 RLLQIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTAELQLQQP---HVVRLETRPPNIEGEGEITMRDL  317 (483)
Q Consensus       241 ~~l~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~~El~l~~~---~~v~~~~~~~~~e~~~~~t~~~l  317 (483)
T Consensus       355 ~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Q------r-~hlF~~T  427 (573)
T COG4987         355 KNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQ------R-VHLFSGT  427 (573)
T ss_pred             HCCCEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHCCHHHHHHHHHHHCC------C-HHHHHHH
T ss_conf             05651325887688877999878999999972358788736578867331883668998754123------2-1777778


Q ss_pred             HHHHHHC-CCCEEEECCCCCHHHHHHHHHHHCCC
Q ss_conf             9875205-99889965758799999999987397
Q gi|254780724|r  318 VKNCLRM-RPERIILGEVRGPEVLDLLQAMNTGH  350 (483)
Q Consensus       318 l~~aLR~-~PD~IiVGEiRg~Ea~~~l~A~~TGH  350 (483)
T Consensus       428 lr~NL~lA~~~------AsDEel~~aL~qvgL~~  455 (573)
T COG4987         428 LRDNLRLANPD------ASDEELWAALQQVGLEK  455 (573)
T ss_pred             HHHHHHHCCCC------CCHHHHHHHHHHCCHHH
T ss_conf             99877305999------98899999999818799