HHsearch alignment for GI: 254780724 and conserved domain: PRK06835

Probab=95.90  E-value=0.019  Score=35.72  Aligned_cols=98  Identities=20%  Similarity=0.338  Sum_probs=56.9

Q ss_pred             HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHH
Q ss_conf             99989862258848998188888889999998303876767999642131256787567787416666530001899998
Q gi|254780724|r  240 ARLLQIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTAELQLQQPHVVRLETRPPNIEGEGEITMRDLVK  319 (483)
Q Consensus       240 ~~~l~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~~El~l~~~~~v~~~~~~~~~e~~~~~t~~~ll~  319 (483)
T Consensus       173 ~~fi~~F~~~~~nLlf~G~~G~GKTfLa~~IA~ell~~g~sViy~ta~~L~~~-l~~~~~---------~~~~~~~~~~~  242 (330)
T PRK06835        173 LNFIKNFDKNNENLLFYGNTGTGKTFLSNCIAKELLDRGKTVIYRTSDELIEN-LREIRF---------NNDNDAPELED  242 (330)
T ss_pred             HHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHH-HHHHHC---------CCCCCHHHHHH
T ss_conf             99987247888866988999998899999999999987994999629999999-999754---------57644899999


Q ss_pred             HHHHCCCCEEEECCCCC---HH--HHHHHHHHHCC
Q ss_conf             75205998899657587---99--99999998739
Q gi|254780724|r  320 NCLRMRPERIILGEVRG---PE--VLDLLQAMNTG  349 (483)
Q Consensus       320 ~aLR~~PD~IiVGEiRg---~E--a~~~l~A~~TG  349 (483)
T Consensus       243 ~l--~~~DLLIIDDLG~E~~t~~~~~~Lf~iIN~R  275 (330)
T PRK06835        243 LL--INCDLLIIDDLGTESITEFSKTELFNLINKR  275 (330)
T ss_pred             HH--HHCCEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf             99--6189899721034558868999999999999