HHsearch alignment for GI: 254780724 and conserved domain: PRK08727

Probab=96.66  E-value=0.058  Score=32.33  Aligned_cols=162  Identities=16%  Similarity=0.145  Sum_probs=81.0

Q ss_pred             CCCCCHHHHHHCCCCCHHHHHHHHHHHCCC--CCEEEECCCCCCHHHHHHHHHHHCC-CCCCEEEE--ECCHHHC-----
Q ss_conf             654667888650699889999989862258--8489981888888899999983038-76767999--6421312-----
Q gi|254780724|r  221 KDKLTLDHLVSFGAVTAEGARLLQIIGRIR--CNVLISGGTGSGKTTLLNCLTRYID-KDERIVTC--EDTAELQ-----  290 (483)
Q Consensus       221 ~~~~~l~~l~~~g~~~~~~~~~l~~~v~~~--~nilVsG~TGSGKTT~L~al~~~i~-~~~rivtI--ED~~El~-----  290 (483)
T Consensus        13 ~~~~tfdnFi~~--~n~~~a~-l~~~~~~~~~~~lyl~G~~GsGKTHLl~a~~~~~~~~~~~~~yl~l~~~~~~~~~~l~   89 (233)
T PRK08727         13 PSDQRFDSYIAA--PDGLLAQ-LQALAAGQSSDWLYLSGPAGTGKTHLALSLCAAAEQAGRSSAYLPLQAAAGRLRDALE   89 (233)
T ss_pred             CCCCCHHHCCCC--CHHHHHH-HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH
T ss_conf             972242120678--5599999-9987438888989998999998899999999999827997288447885320256775


Q ss_pred             -CCCCCEEEEEEEC-CCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHH-----HHHHHHHCCCCEEEHHHCCCCHH
Q ss_conf             -5678756778741-6666530001899998752059988996575879999-----99999873970102000478888
Q gi|254780724|r  291 -LQQPHVVRLETRP-PNIEGEGEITMRDLVKNCLRMRPERIILGEVRGPEVL-----DLLQAMNTGHDGSMGTIHANNAR  363 (483)
Q Consensus       291 -l~~~~~v~~~~~~-~~~e~~~~~t~~~ll~~aLR~~PD~IiVGEiRg~Ea~-----~~l~A~~TGH~G~ltTlHa~s~~  363 (483)
T Consensus        90 ~le~~~ll~iDDid~i~g~~~~e~aLFhL~N~~-~~~~~~ll~ts~~~P~~l~~~l~DL~SRL~~~---~~~~l~~~dD~  165 (233)
T PRK08727         90 ALEGRSLVALDGVDSIAGQREDEVALFDFHNRA-RAAGITLLYTARQMPDGLALVLPDLRSRLSQC---IRIGLPVLDDV  165 (233)
T ss_pred             HHCCCCEEEEECCHHCCCCHHHHHHHHHHHHHH-HHCCCEEEEECCCCHHHHCCCHHHHHHHHHCC---CEEEECCCCHH
T ss_conf             310389789855011269827999999999999-86198389977989566231002199999669---22885788979


Q ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf             89999997553046799989999999
Q gi|254780724|r  364 ESFGRMEAMIAMGGFTLPSQMVREII  389 (483)
Q Consensus       364 ~ai~RL~~m~~~~~~~~~~~~~~~~i  389 (483)
T Consensus       166 ~~~~iL~~~a~~rgl~l~~~V~~Yll  191 (233)
T PRK08727        166 ARAAVLRDRAQRRGLALDEAAIDWLL  191 (233)
T ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf             99999999999869999989999999