HHsearch alignment for GI: 254780724 and conserved domain: PRK09580

Probab=96.66  E-value=0.0027  Score=41.65  Aligned_cols=41  Identities=29%  Similarity=0.229  Sum_probs=31.6

Q ss_pred             HHHHCCCCCEEEECCCCCCHHHHHHHHHHH--CCCCCCEEEEE
Q ss_conf             986225884899818888888999999830--38767679996
Q gi|254780724|r  244 QIIGRIRCNVLISGGTGSGKTTLLNCLTRY--IDKDERIVTCE  284 (483)
Q Consensus       244 ~~~v~~~~nilVsG~TGSGKTT~L~al~~~--i~~~~rivtIE  284 (483)
T Consensus        21 sl~i~~Gei~~iiG~nGaGKSTLl~~i~G~~~~~~~~G~I~~~   63 (248)
T PRK09580         21 NLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVTFK   63 (248)
T ss_pred             EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEC
T ss_conf             8898499799999999999999999983775568752359999