HHsearch alignment for GI: 254780724 and conserved domain: PRK10436

Probab=100.00  E-value=1.1e-42  Score=316.96  Aligned_cols=266  Identities=21%  Similarity=0.295  Sum_probs=217.6

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEECCCC---EEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             896789999999999885656335885883321799856991---89982783897176207989999999999998098
Q gi|254780724|r  105 MSLDEQLDLFEDLCNDILGYGPLQPLIARDDIADIMVNGSNK---VFIEVNGKTVETGINFRDNEQLLSVCQRIVNQVGR  181 (483)
Q Consensus       105 ~~~~~~~~l~~~i~~e~~glGpL~~ll~D~~VsdI~ing~~~---I~ve~~G~~~~~~~~f~~~~~l~~~i~rla~~~g~  181 (483)
T Consensus        76 ~~~~piv~lvn~il~~Ai~~~----------ASDIHieP~~~~~~Ir~RiDG~L~~~~~--l~~~~~~~l~sriK~la~l  143 (461)
T PRK10436         76 EGDQPVAQLLNQTLRSALQKR----------ASDIHFEPAQNHYRIRLRIDGVLHPLPD--PSPETGAALTARLKVLGNL  143 (461)
T ss_pred             CCCCHHHHHHHHHHHHHHHCC----------CCEEEEEECCCCEEEEEEECCEEEEECC--CCHHHHHHHHHHHHHHCCC
T ss_conf             677779999999999999759----------9658998469818999986899988515--8987899999999997499


Q ss_pred             CCCCCCCEEEEEEC---CCCEEEE--ECCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             12433877879823---7620345--315535788168884057654667888650699889999989862258848998
Q gi|254780724|r  182 RVDESSPICDARLL---DGSRVNV--IIPPLALDGPTLTIRKFKKDKLTLDHLVSFGAVTAEGARLLQIIGRIRCNVLIS  256 (483)
Q Consensus       182 ~i~~~~P~~d~~lp---dg~Ri~~--~~~p~s~~G~~i~IRk~~~~~~~l~~l~~~g~~~~~~~~~l~~~v~~~~nilVs  256 (483)
T Consensus       144 diae~r~PQdGr~~~~~~~~~id~Rvst~P-t~~GE~ivlRlL~~~~~-~~~L~~LG~~~~~~~~~~~~~~~p~GliLvt  221 (461)
T PRK10436        144 DIAEHRLPQDGQFTVELAGNAYSFRIATLP-CRGGEKVVLRLLQQVQQ-TLDLETLGMTPAQLAQFRQALQQPQGLVLVT  221 (461)
T ss_pred             CHHHCCCCCCCCEEEEECCEEEEEEEEECC-CCCCCEEEEEEECCCCC-CCCHHHHCCCHHHHHHHHHHHHCCCCEEEEE
T ss_conf             812055687782799889968999999334-67887789995246656-6888784889999999999983899779997


Q ss_pred             CCCCCCHHHHHHHHHHHC-CCCCCEEEEECCHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf             188888889999998303-8767679996421312567875677874166665300018999987520599889965758
Q gi|254780724|r  257 GGTGSGKTTLLNCLTRYI-DKDERIVTCEDTAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIILGEVR  335 (483)
Q Consensus       257 G~TGSGKTT~L~al~~~i-~~~~rivtIED~~El~l~~~~~v~~~~~~~~~e~~~~~t~~~ll~~aLR~~PD~IiVGEiR  335 (483)
T Consensus       222 GPTGSGKTTTLya~L~~l~~~~~~I~TiEDPVE~~l~gi~Q~~v-------n~~~g~tfa~~lrs~LRqDPDVImvGEIR  294 (461)
T PRK10436        222 GPTGSGKTVTLYSALQTLNTAQINICSVEDPVEIPLAGINQTQI-------HPRAGLTFQRVLRALLRQDPDVIMVGEIR  294 (461)
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEE-------CCCCCHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf             89999569999999974346771699960774355467545231-------32213139999999874699999865778


Q ss_pred             CHHHH-HHHHHHHCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEEEEC
Q ss_conf             79999-99999873970102000478888899999975530467999899999997423588999876
Q gi|254780724|r  336 GPEVL-DLLQAMNTGHDGSMGTIHANNARESFGRMEAMIAMGGFTLPSQMVREIITSSLDVIVQTQRL  402 (483)
Q Consensus       336 g~Ea~-~~l~A~~TGH~G~ltTlHa~s~~~ai~RL~~m~~~~~~~~~~~~~~~~ia~avd~iV~~~r~  402 (483)
T Consensus       295 D~eTA~~Ai~AAlTGHL-VlsTlHtnda~~ai~RL~~m------gi~~~----lla~~L~~ViaQRLV  351 (461)
T PRK10436        295 DGETAEIAIKAAQTGHL-VLSTLHTNSTSETLIRLQQM------GVARW----MISSALTLVIAQRLV  351 (461)
T ss_pred             CHHHHHHHHHHHHHCCE-EEEEECCCCHHHHHHHHHHC------CCCHH----HHHHHHHHEEECCCC
T ss_conf             89999999999971984-88986269778899999983------99888----999866334775034