HHsearch alignment for GI: 254780724 and conserved domain: PRK10762
>PRK10762 D-ribose transporter ATP binding protein; Provisional.
Probab=96.69 E-value=0.0024 Score=41.99 Aligned_cols=146 Identities=16% Similarity=0.220 Sum_probs=72.7
Q ss_pred HCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEECCCCEEEEECCEEEEC-CCCCCCHHHHHHHHHHHHHH
Q ss_conf 41877896789999999999885656335885883321799856991899827838971-76207989999999999998
Q gi|254780724|r 100 VKKITMSLDEQLDLFEDLCNDILGYGPLQPLIARDDIADIMVNGSNKVFIEVNGKTVET-GINFRDNEQLLSVCQRIVNQ 178 (483)
Q Consensus 100 ~~~~~~~~~~~~~l~~~i~~e~~glGpL~~ll~D~~VsdI~ing~~~I~ve~~G~~~~~-~~~f~~~~~l~~~i~rla~~ 178 (483)
T Consensus 167 EPt~~Ld~~~~~~l~~~l-~~l~~~g~-til~isH~l~~~~-~~~drv~vl~~G~iv~~~~~~~~~~~~l---~~~---~ 237 (501)
T PRK10762 167 EPTDALTDTETESLFRVI-RELKSQGR-GIVYISHRMKEIF-EICDDVTVLRDGQFIGEREVASLTEDSL---IEM---M 237 (501)
T ss_pred CCCCCCCHHHHHHHHHHH-HHHHHCCC-CEEEECCCHHHHH-HCCCCCEEECCCEEEEEECHHHCCHHHH---HHH---H
T ss_conf 875578878889999988-78774484-1477514257664-2146411312781897824453799999---887---5
Q ss_pred HCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECC
Q ss_conf 09812433877879823762034531553578816888405765466788865069988999998986225884899818
Q gi|254780724|r 179 VGRRVDESSPICDARLLDGSRVNVIIPPLALDGPTLTIRKFKKDKLTLDHLVSFGAVTAEGARLLQIIGRIRCNVLISGG 258 (483)
Q Consensus 179 ~g~~i~~~~P~~d~~lpdg~Ri~~~~~p~s~~G~~i~IRk~~~~~~~l~~l~~~g~~~~~~~~~l~~~v~~~~nilVsG~ 258 (483)
T Consensus 238 ~g~~~~~~~p~~~~~---------------~~~~~l~~~~ls~~~--l--------------~~vs~~v~~GEi~gi~G~ 286 (501)
T PRK10762 238 VGRKLEDQYPHLDKA---------------PGEIRLKVDNLCGPG--V--------------NDVSFTLRKGEILGVSGL 286 (501)
T ss_pred HCCCHHHHCCCCCCC---------------CCCEEEEEEECCCCC--C--------------CCEEEEECCCCEEEEECC
T ss_conf 145513307776688---------------886489986314676--5--------------634447668818996678
Q ss_pred CCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 888888999999830387676799964
Q gi|254780724|r 259 TGSGKTTLLNCLTRYIDKDERIVTCED 285 (483)
Q Consensus 259 TGSGKTT~L~al~~~i~~~~rivtIED 285 (483)
T Consensus 287 nGsGKsTL~~~l~Gl~~~~~G~v~~~G 313 (501)
T PRK10762 287 MGAGRTELMKVLYGALPRTSGYVTLDG 313 (501)
T ss_pred CCCCHHHHHHHHHCCCCCCCCEEEECC
T ss_conf 887688999998187677777699999