HHsearch alignment for GI: 254780724 and conserved domain: PRK11889

Probab=96.39  E-value=0.0019  Score=42.67  Aligned_cols=118  Identities=16%  Similarity=0.201  Sum_probs=54.9

Q ss_pred             CCEEEECCCCCCHHHHHHHHHH-HCCCCCCEEEE-ECCHHHCCCCCCEEEEEEECCCCCC---CCCCHHHHHHHHHH-HC
Q ss_conf             8489981888888899999983-03876767999-6421312567875677874166665---30001899998752-05
Q gi|254780724|r  251 CNVLISGGTGSGKTTLLNCLTR-YIDKDERIVTC-EDTAELQLQQPHVVRLETRPPNIEG---EGEITMRDLVKNCL-RM  324 (483)
Q Consensus       251 ~nilVsG~TGSGKTT~L~al~~-~i~~~~rivtI-ED~~El~l~~~~~v~~~~~~~~~e~---~~~~t~~~ll~~aL-R~  324 (483)
T Consensus       242 q~IALVGPTGVGKTTTIAKLAArf~~~~KkVALITtDTYRI--GAVEQLKTYAeIMgVPV~VV~dp~eL~~AL~~lkdka  319 (436)
T PRK11889        242 QTIALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHSRI--GTVQQLQDYVKTIGFEVIAVRDEAAMTRALTYFKEEA  319 (436)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHH--HHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCC
T ss_conf             17999899998889999999999861698089998066347--6999999999984994399688899999999876336


Q ss_pred             CCCEEEECCC----CCHHHHH-H---HHHHHCCCCEEEHHHCCCCHHHHHHHHHHH
Q ss_conf             9988996575----8799999-9---999873970102000478888899999975
Q gi|254780724|r  325 RPERIILGEV----RGPEVLD-L---LQAMNTGHDGSMGTIHANNARESFGRMEAM  372 (483)
Q Consensus       325 ~PD~IiVGEi----Rg~Ea~~-~---l~A~~TGH~G~ltTlHa~s~~~ai~RL~~m  372 (483)
T Consensus       320 ~~DLILIDTAGRS~RD~~~I~EL~~~l~~~~p~e--v~LVLSATTK~~DL~eIi~r  373 (436)
T PRK11889        320 RVDYILIDTAGKNYRASETVEEMIETMGQVEPDY--ICLTLSASMKSKDMIEIITN  373 (436)
T ss_pred             CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCE--EEEEEECCCCHHHHHHHHHH
T ss_conf             8888999298988468999999999985127771--69999788998999999997