HHsearch alignment for GI: 254780724 and conserved domain: PRK13342
>PRK13342 recombination factor protein RarA; Reviewed.
Probab=97.03 E-value=0.029 Score=34.44 Aligned_cols=23 Identities=30% Similarity=0.499 Sum_probs=13.1
Q ss_pred CEEEECCCCCCHHHHHHHHHHHC
Q ss_conf 48998188888889999998303
Q gi|254780724|r 252 NVLISGGTGSGKTTLLNCLTRYI 274 (483)
Q Consensus 252 nilVsG~TGSGKTT~L~al~~~i 274 (483)
T Consensus 39 s~Il~GPPG~GKTTlA~iiA~~~ 61 (417)
T PRK13342 39 SMILWGPPGTGKTTLARIIAGAT 61 (417)
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 59988969998999999999986