HHsearch alignment for GI: 254780724 and conserved domain: PRK13538
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional.
Probab=97.32 E-value=0.0012 Score=44.22 Aligned_cols=42 Identities=29% Similarity=0.277 Sum_probs=34.9
Q ss_pred HHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 986225884899818888888999999830387676799964
Q gi|254780724|r 244 QIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCED 285 (483)
Q Consensus 244 ~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED 285 (483)
T Consensus 21 s~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g 62 (204)
T PRK13538 21 SFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQG 62 (204)
T ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC
T ss_conf 779879989999999998599999999768888873799999