HHsearch alignment for GI: 254780724 and conserved domain: PRK13891
>PRK13891 conjugal transfer protein TrbE; Provisional.
Probab=96.84 E-value=0.00092 Score=44.89 Aligned_cols=41 Identities=24% Similarity=0.293 Sum_probs=28.6
Q ss_pred HHHHHCCCCCEEEECCCCCCHHHHHHHHHHHC-C-CCCCEEEE
Q ss_conf 89862258848998188888889999998303-8-76767999
Q gi|254780724|r 243 LQIIGRIRCNVLISGGTGSGKTTLLNCLTRYI-D-KDERIVTC 283 (483)
Q Consensus 243 l~~~v~~~~nilVsG~TGSGKTT~L~al~~~i-~-~~~rivtI 283 (483)
T Consensus 481 fN~Hv~DvGHTlIiGpTGaGKTvll~fL~aQ~~rY~~~~vf~F 523 (852)
T PRK13891 481 LNLHVRDLGHTFMFGPTGAGKSTHLGIIAAQLRRYAGMSIYAF 523 (852)
T ss_pred EECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 8545688664078789999889999999999744189818987