HHsearch alignment for GI: 254780724 and conserved domain: PTZ00265
>PTZ00265 multidrug resistance protein (mdr1); Provisional.
Probab=96.84 E-value=0.0026 Score=41.73 Aligned_cols=41 Identities=22% Similarity=0.302 Sum_probs=23.2
Q ss_pred HHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 98622588489981888888899999983038767679996
Q gi|254780724|r 244 QIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCE 284 (483)
Q Consensus 244 ~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIE 284 (483)
T Consensus 405 sl~i~~G~t~AlVG~SGsGKSTii~LL~RfYdP~~G~I~i~ 445 (1467)
T PTZ00265 405 NFTLKEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIIN 445 (1467)
T ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEC
T ss_conf 38863897799866888756679999963268899869978